Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 MTCYBP18-201ENST00000501056 747 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AC018710.1-201ENST00000506509 158 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AC117522.3-201ENST00000507974 584 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 LRRC34P2-201ENST00000514850 553 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 Y_RNA.689-201ENST00000516589 107 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AL137161.1-201ENST00000532231 390 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 TVP23BP1-201ENST00000557500 617 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AC034105.4-201ENST00000568304 277 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AC010201.1-201ENST00000605051 540 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AL158032.1-201ENST00000605401 106 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AL355073.2-201ENST00000612106 557 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AC048347.1-201ENST00000624621 427 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 ASNSP3-201ENST00000451989 1306 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 AL672296.1-201ENST00000427780 2158 ntBASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHGA3Q9Y5H0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU1-15P-201ENST00000353977 144 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL078595.1-201ENST00000404458 226 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL356776.1-201ENST00000406574 447 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 HSPE1P8-201ENST00000406997 288 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 RPS12P24-201ENST00000412619 387 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL356095.1-201ENST00000417217 199 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL157831.1-201ENST00000426134 473 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 SRIP2-201ENST00000428470 166 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 RPL36AP53-201ENST00000432891 316 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL591212.2-201ENST00000433923 257 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 CBWD4P-201ENST00000445695 655 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL162395.1-201ENST00000457882 422 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 RPS4XP13-201ENST00000483219 789 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 RPS15AP34-201ENST00000487776 387 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL160314.1-201ENST00000490836 438 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AC020593.1-201ENST00000507399 299 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AC099522.1-202ENST00000514718 367 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU6-123P-201ENST00000516163 102 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 SUB1P1-201ENST00000524415 382 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 CENPUP1-201ENST00000526649 1202 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL121576.1-201ENST00000556055 276 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 RPL23AP87-202ENST00000573039 466 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 RN7SL600P-201ENST00000581811 299 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AC010525.2-201ENST00000590920 195 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AC007687.1-201ENST00000602704 304 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 DPPA3P3-201ENST00000603842 430 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL670379.4-201ENST00000605279 254 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 RMST_3.1-201ENST00000611651 109 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 uc_338.32-201ENST00000615087 172 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL021997.2-201ENST00000615674 271 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AL357559.1-201ENST00000622228 274 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AC008785.1-201ENST00000624475 456 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA3Q9Y5H0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU1-14P-201ENST00000362759 152 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 Y_RNA.160-201ENST00000363677 92 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 RNA5SP175-201ENST00000364275 119 ntBASIC4.11□□□□□ -1.75
PCDHGA3Q9Y5H0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms