Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 SNORA9-201ENST00000384215 133 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 Y_RNA.465-201ENST00000384293 102 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 MIR128-1-201ENST00000384921 82 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 AL139421.1-201ENST00000423010 169 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 ATP5F1P1-201ENST00000433775 569 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 AC098826.1-201ENST00000433943 471 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.92□□□□□ -1.94
SMC3Q9UQE7 AL445687.1-201ENST00000439946 251 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 SNORD109B-201ENST00000458961 67 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 SNORD109A-201ENST00000459128 67 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 AC087588.1-201ENST00000462203 316 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.92□□□□□ -1.94
SMC3Q9UQE7 AC147055.4-201ENST00000504399 745 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 HSPE1P23-201ENST00000509838 286 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.92□□□□□ -1.94
SMC3Q9UQE7 RNU6-928P-201ENST00000516876 104 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 SNORA31.18-201ENST00000517043 134 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 DEFB131D-201ENST00000526803 184 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.92□□□□□ -1.94
SMC3Q9UQE7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.92□□□□□ -1.94
SMC3Q9UQE7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.92□□□□□ -1.94
SMC3Q9UQE7 ELOCP29-201ENST00000588193 334 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 AC011890.2-201ENST00000613393 294 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.92□□□□□ -1.94
SMC3Q9UQE7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SMC3Q9UQE7 AL022578.1-201ENST00000439330 1433 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SMC3Q9UQE7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SMC3Q9UQE7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AP000568.1-201ENST00000282964 442 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 RNA5SP456-201ENST00000364002 114 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 RNA5SP387-201ENST00000364226 106 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 MIR767-201ENST00000390228 109 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 RNU6-952P-201ENST00000391164 108 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 SPA17P1-201ENST00000416656 452 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AC009414.1-201ENST00000427200 443 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 USP9YP24-201ENST00000434374 697 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AC009296.1-201ENST00000443146 155 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 USP9YP17-201ENST00000444617 696 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AP000936.2-201ENST00000447151 681 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 snoU13.8-201ENST00000458890 104 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AC108729.1-201ENST00000487812 947 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AC093677.1-201ENST00000514414 678 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 SCARNA15.2-201ENST00000516409 127 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AC090888.1-201ENST00000561335 1141 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 VN1R90P-201ENST00000595717 726 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AL356280.1-201ENST00000603614 379 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AC105148.1-201ENST00000604961 409 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 ATP1B3P1-201ENST00000605365 821 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AL139418.1-201ENST00000613613 177 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AC079395.3-201ENST00000615161 484 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AL590099.1-201ENST00000615276 138 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AL445264.1-201ENST00000621719 171 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 AP001002.2-201ENST00000625137 386 ntBASIC2.91□□□□□ -1.94
SMC3Q9UQE7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SMC3Q9UQE7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SMC3Q9UQE7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SMC3Q9UQE7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
SMC3Q9UQE7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.9□□□□□ -1.94
SMC3Q9UQE7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
SMC3Q9UQE7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 RNU6-636P-201ENST00000384598 107 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 MIR1284-201ENST00000408337 120 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 RNU2-52P-201ENST00000410680 190 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AL358075.3-201ENST00000426289 226 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AC107083.1-201ENST00000439643 279 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 WASF1P1-201ENST00000447560 1131 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 RPL21P134-201ENST00000453468 483 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 BX322784.1-201ENST00000455793 1077 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 RPL31P50-201ENST00000471002 296 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AC116353.3-201ENST00000511215 249 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 TTC39CP1-201ENST00000512513 755 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.9□□□□□ -1.95
SMC3Q9UQE7 AC009712.1-201ENST00000564938 316 ntBASIC2.9□□□□□ -1.95
SMC3Q9UQE7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms