Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 Y_RNA.158-201ENST00000363651 101 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RNU4-1-201ENST00000363925 141 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 Y_RNA.257-201ENST00000364596 102 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RNA5SP126-201ENST00000365092 109 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 MTCO2P33-201ENST00000402100 465 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RNU6-101P-201ENST00000410323 104 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RNU6-193P-201ENST00000410977 107 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RPL37P10-201ENST00000412884 288 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC234782.4-201ENST00000417646 1048 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AL590609.2-201ENST00000421430 368 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RPL7P29-201ENST00000437151 728 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RPS24P13-201ENST00000442520 397 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 MTND3P16-201ENST00000452205 344 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC005008.1-201ENST00000456151 612 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 BTF3P5-201ENST00000457252 467 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RPL5P30-201ENST00000465511 891 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC012158.1-204ENST00000483430 465 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC112204.1-201ENST00000502591 103 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC006499.2-201ENST00000513470 337 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 NARSP2-201ENST00000518524 679 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 RNU6-988P-201ENST00000519081 107 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC090572.1-201ENST00000519251 160 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 SCOCP1-201ENST00000554676 349 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC026464.5-201ENST00000562497 722 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC006363.1-201ENST00000603806 463 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC007938.3-201ENST00000604965 623 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC009318.4-201ENST00000620496 486 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 GTF2H2B-203ENST00000508065 1432 ntBASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC2.86□□□□□ -1.95
NOTCH3Q9UM47 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 RNU6-289P-201ENST00000364093 107 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC117470.1-201ENST00000381974 330 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 RNU6-1297P-201ENST00000384415 104 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 MIR548I2-201ENST00000408348 149 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC017079.2-201ENST00000416102 485 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 HSPE1P1-201ENST00000421494 318 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC017083.1-201ENST00000428093 483 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AL160004.2-201ENST00000432935 350 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 HMGB3P10-201ENST00000434734 572 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 TXNP1-201ENST00000441872 371 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 CALM1P2-201ENST00000452941 448 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC135999.1-201ENST00000478962 479 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 MRPS35P2-201ENST00000508242 191 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC113195.1-201ENST00000579952 141 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC073539.2-201ENST00000597113 165 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 MTCO1P24-201ENST00000515438 1558 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 OR4G1P-203ENST00000641984 1631 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 RNU6-777P-201ENST00000364265 104 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 SET-203ENST00000372688 801 ntTSL 2 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 RNA5SP306-201ENST00000411087 107 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 RPL23AP69-201ENST00000431134 458 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 RPL21P110-201ENST00000433345 446 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AC104332.1-201ENST00000440471 797 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 AL353093.1-201ENST00000441292 436 ntBASIC2.85□□□□□ -1.95
NOTCH3Q9UM47 BX248409.1-201ENST00000455497 255 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms