Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 APOOP3-201ENST00000536787 586 ntBASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 AC069240.1-201ENST00000548774 375 ntBASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 AC138761.3-201ENST00000579993 334 ntBASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 Z98200.1-201ENST00000607298 470 ntBASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 AC022893.3-201ENST00000607665 437 ntBASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 MTND5P42-201ENST00000637720 498 ntBASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 AC092435.4-201ENST00000623012 4159 ntBASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KCMF1Q9P0J7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 PRO1804-201ENST00000623780 2050 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 MIR331-201ENST00000362302 94 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 Y_RNA.128-201ENST00000363391 112 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 Y_RNA.212-201ENST00000364177 102 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 Y_RNA.216-201ENST00000364205 93 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 RNA5SP22-201ENST00000365393 109 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 SNORD42.2-201ENST00000365570 69 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 RNU6-474P-201ENST00000384243 107 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 RNU6-434P-201ENST00000384376 107 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 HSPE1P8-201ENST00000406997 288 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 SNORA11F-201ENST00000408237 128 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 MTATP6P4-201ENST00000427725 675 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC011998.1-201ENST00000433403 117 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AL591212.2-201ENST00000433923 257 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 RPL23AP24-201ENST00000458203 385 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 RNU6-953P-201ENST00000459154 107 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 RN7SL812P-201ENST00000493791 279 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 VN1R104P-201ENST00000505115 1009 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC108043.1-201ENST00000512696 574 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 RNU2-69P-201ENST00000516061 100 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 RNU6-327P-201ENST00000516270 127 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC090115.3-201ENST00000553218 849 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 MTND6P33-201ENST00000571794 183 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC007151.1-201ENST00000572774 483 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC023043.2-201ENST00000589678 1026 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC124303.1-201ENST00000605703 360 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 RNA5SP108-201ENST00000605921 117 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC083809.1-201ENST00000615051 472 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 NOL8P1-201ENST00000508336 3529 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 AC009812.4-201ENST00000569134 1805 ntBASIC4.14□□□□□ -1.75
KCMF1Q9P0J7 MFSD8-242ENST00000641690 4199 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 MTCO1P12-201ENST00000414273 1543 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 MIR448-201ENST00000362131 111 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RN7SKP44-201ENST00000363602 316 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RNA5SP235-201ENST00000365411 114 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 SNORA4.3-201ENST00000365564 137 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 Y_RNA.399-201ENST00000383955 105 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RNU6-629P-201ENST00000384061 103 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 MIR93-201ENST00000385024 80 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 MIR559-201ENST00000385188 96 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 SNORA75.4-201ENST00000391278 119 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RPS4XP7-201ENST00000406274 780 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RNU4-25P-201ENST00000410569 230 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RPLP0P7-201ENST00000416050 667 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AL669831.1-202ENST00000428504 417 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AC069285.2-201ENST00000440210 275 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 Y_RNA.639-201ENST00000458981 102 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RNU7-167P-201ENST00000459160 62 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RN7SL98P-201ENST00000462271 300 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RPS23P7-201ENST00000466210 444 ntBASIC4.13□□□□□ -1.75
KCMF1Q9P0J7 RN7SL385P-201ENST00000468873 276 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms