Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU6-701P-201ENST00000384059 107 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 MIR554-201ENST00000384874 96 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 MIR558-201ENST00000384920 94 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 RN7SKP53-201ENST00000411337 315 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 GPR143P-201ENST00000434155 205 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 RPS29P7-201ENST00000439662 171 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 DNAJC19P4-201ENST00000440115 345 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 NANOGNBP1-201ENST00000448444 480 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 HMGB3P8-201ENST00000449709 577 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC023598.1-201ENST00000472521 361 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 RPL30P5-201ENST00000494923 336 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 RPL37P25-201ENST00000507308 276 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC108078.1-201ENST00000508073 725 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 TTC39CP1-201ENST00000512513 755 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-720P-201ENST00000516363 108 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 SCARNA24.1-201ENST00000516465 137 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 SNORA70.18-201ENST00000516696 98 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 MIR2276-201ENST00000516886 89 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-410P-201ENST00000517006 107 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 RNU1-45P-201ENST00000517191 141 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 HMGB1P41-201ENST00000520234 440 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC022880.1-201ENST00000534017 973 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 TGIF1P1-201ENST00000558095 802 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 DPPA3P3-201ENST00000603842 430 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC245389.1-201ENST00000605141 529 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC009570.1-201ENST00000609599 745 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC099778.2-201ENST00000610904 211 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC122108.2-201ENST00000611946 526 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 AC138649.3-201ENST00000622154 254 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 LRRC77P-213ENST00000637727 880 ntBASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC6A13Q9NSD5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 RNA5SP295-201ENST00000362655 121 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-181P-201ENST00000363225 107 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-1097P-201ENST00000363586 107 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 SNORA62.3-201ENST00000365110 153 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-741P-201ENST00000383889 107 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 GSTA9P-201ENST00000406231 611 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 RN7SKP156-201ENST00000410308 342 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 Z85995.1-201ENST00000415547 335 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AC068533.1-201ENST00000418542 415 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 MTCO2P11-201ENST00000431069 680 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AC079781.2-201ENST00000446424 169 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AC132479.1-201ENST00000449160 144 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 RN7SL542P-201ENST00000467147 294 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 HMGB1P29-201ENST00000505659 499 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AC010493.1-201ENST00000513479 292 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 SNORA31.3-201ENST00000516029 96 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-445P-201ENST00000516949 107 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AP006587.4-201ENST00000526053 529 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AC245505.1-201ENST00000556398 224 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 MIR4429-201ENST00000580105 73 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 AC067852.3-201ENST00000589177 561 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 CUL1P1-201ENST00000509510 2425 ntBASIC3.34□□□□□ -1.87
SLC6A13Q9NSD5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SLC6A13Q9NSD5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SLC6A13Q9NSD5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 Y_RNA.22-201ENST00000362492 102 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 RNU6-188P-201ENST00000364207 107 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 RNA5SP51-201ENST00000364750 119 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 RN7SKP226-201ENST00000364912 300 ntBASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC6A13Q9NSD5 SMIM11P1-201ENST00000369586 178 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms