Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 Y_RNA.576-201ENST00000384781 102 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 MIR483-201ENST00000385070 76 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 RPL30P15-201ENST00000457129 321 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 snoU13.24-201ENST00000458998 104 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AC104806.1-201ENST00000508720 308 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 RNU6-27P-201ENST00000516146 107 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 RNA5SP360-201ENST00000516555 118 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AC006006.1-201ENST00000603082 144 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AC092747.3-201ENST00000603769 301 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AC104662.1-201ENST00000604448 511 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AP000654.2-201ENST00000605633 586 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AL121772.2-201ENST00000614331 297 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 Z95331.1-201ENST00000623075 23112 ntBASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
PDLIM7Q9NR12 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PDLIM7Q9NR12 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 MTND4P1-201ENST00000457501 1466 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 RNU6-1287P-201ENST00000362914 107 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 RNU6-1188P-201ENST00000363795 107 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 RNU6-196P-201ENST00000384315 107 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 RNU6-1060P-201ENST00000384664 107 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 POLHP1-201ENST00000411806 470 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AL139396.1-201ENST00000421137 167 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 ELOCP18-201ENST00000434209 337 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 RPS17P13-201ENST00000448974 407 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 Y_RNA.653-201ENST00000459091 95 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC012158.1-204ENST00000483430 465 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 RPS27P27-201ENST00000498779 255 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 MTCYBP40-201ENST00000509390 1135 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 MTCO3P44-201ENST00000510977 541 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 RNU6-256P-201ENST00000516747 97 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 IMMP1LP2-201ENST00000552954 492 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 MIR5690-201ENST00000583739 73 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 AC007179.3-201ENST00000604976 235 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 DUSP12P1-201ENST00000612874 516 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 RMST_9.1-201ENST00000619945 193 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 MTND5P10-201ENST00000603719 1809 ntBASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM7Q9NR12 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RNU6-82P-201ENST00000363970 107 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RNU6-1279P-201ENST00000383917 103 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RNU6-1106P-201ENST00000390845 107 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AL590704.1-201ENST00000402856 794 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AL121834.1-202ENST00000404494 277 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RNU6-516P-201ENST00000411381 104 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RAB9AP3-201ENST00000412737 573 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RPL31P12-201ENST00000422587 358 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RPL7P46-201ENST00000425129 740 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AC093106.2-201ENST00000428212 385 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RPL36AP6-201ENST00000435770 321 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AC005094.1-201ENST00000440420 368 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RAB9AP1-201ENST00000449393 573 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 MTCO3P10-201ENST00000455912 772 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 RPL36AP13-201ENST00000457490 317 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AC135721.1-201ENST00000497954 479 ntBASIC4.7□□□□□ -1.66
PDLIM7Q9NR12 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms