Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AP002826.1-201ENST00000608835 315 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC009487.2-201ENST00000420969 6821 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC092326.2-201ENST00000624772 1561 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 CCT4P2-201ENST00000233836 1548 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 Y_RNA.548-201ENST00000384656 105 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 SNORA3.2-201ENST00000408221 125 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 RPS7P13-201ENST00000413955 498 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC007390.1-201ENST00000415722 356 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 RSU1P2-202ENST00000437884 485 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 COX6CP12-201ENST00000446748 202 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AL162389.1-201ENST00000449233 177 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 ELL2P3-201ENST00000457883 1602 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC116337.2-201ENST00000477662 156 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC006445.2-201ENST00000510061 472 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 RNA5SP148-201ENST00000516527 94 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AP003497.1-201ENST00000528472 562 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC011260.1-201ENST00000578420 472 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AL590229.1-201ENST00000603497 542 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC098826.3-201ENST00000603823 466 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC012443.1-201ENST00000605605 231 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC092354.1-201ENST00000606057 376 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 AL159972.1-201ENST00000625150 448 ntBASIC3.44□□□□□ -1.86
ZNF541Q9H0D2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 RPL7P26-201ENST00000333817 754 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 RNU1-75P-201ENST00000347264 129 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 U8.2-201ENST00000363156 134 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 MIR9-1-201ENST00000385198 89 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 CCNG1P1-201ENST00000406783 885 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 RPL35AP22-201ENST00000436855 335 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AC022483.1-201ENST00000514020 567 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AP001646.1-201ENST00000527936 915 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AC027176.1-201ENST00000560204 514 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AC091489.2-201ENST00000566263 604 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AC010620.1-201ENST00000601088 1102 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 U73023.1-201ENST00000603134 700 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AL031775.1-201ENST00000607014 887 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AC073114.1-201ENST00000612027 490 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AC008121.2-201ENST00000614647 523 ntBASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF541Q9H0D2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 TAB3P1-202ENST00000452645 1634 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 PWAR6-201ENST00000552334 4618 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 AC009902.3-201ENST00000606235 2172 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 AC007256.1-201ENST00000392253 2765 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 AC138915.3-201ENST00000562908 1389 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 AC091152.2-201ENST00000591628 2569 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 DDX10P1-201ENST00000448545 1933 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 RNA5SP295-201ENST00000362655 121 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 RNU5F-6P-201ENST00000362979 116 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 RNU6-533P-201ENST00000384144 107 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 MIR1302-8-201ENST00000408342 128 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 MTND1P21-201ENST00000412991 285 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 AC233728.2-201ENST00000425348 757 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 AC009961.3-201ENST00000449832 765 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 MTND2P24-201ENST00000453434 806 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 CBX3P3-201ENST00000508108 532 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 RNU6-840P-201ENST00000517275 65 ntBASIC3.42□□□□□ -1.86
ZNF541Q9H0D2 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms