Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AC012119.1-201ENST00000603184 222 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 AC104662.1-201ENST00000604448 511 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 MIR1302-1-201ENST00000637932 143 ntBASIC4.59□□□□□ -1.67
TRIM55Q9BYV6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
TRIM55Q9BYV6 ZFRP1-201ENST00000457579 2970 ntBASIC4.59□□□□□ -1.68
TRIM55Q9BYV6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TRIM55Q9BYV6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC015813.6-201ENST00000624409 5808 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 Y_RNA.301-201ENST00000364990 103 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC068538.1-201ENST00000376856 336 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 DEFB109C-201ENST00000382575 264 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 DEFB109B-201ENST00000382656 264 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 RNU6-1013P-201ENST00000384180 107 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 MIR578-201ENST00000384828 96 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AL445189.1-201ENST00000405722 338 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 RPL21P90-201ENST00000415692 466 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 RPL7P10-201ENST00000417407 739 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 RPL23AP25-201ENST00000430973 463 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 PIGFP3-201ENST00000441918 722 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC009237.8-201ENST00000445492 379 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC015795.1-201ENST00000513669 327 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 SNORA14.1-201ENST00000516113 141 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 RNU6-277P-201ENST00000516272 106 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 RNA5SP290-201ENST00000517133 127 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 RN7SKP92-201ENST00000517266 244 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AP000889.2-201ENST00000532684 490 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC069240.1-201ENST00000548774 375 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 MIR4284-201ENST00000578924 81 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 MIR5692A1-201ENST00000580523 69 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 MIR548AC-201ENST00000585049 88 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC073539.2-201ENST00000597113 165 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AL121757.2-201ENST00000611223 313 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC104237.2-201ENST00000612456 443 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 AC091905.2-201ENST00000623143 306 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 CR381572.2-201ENST00000624852 397 ntBASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRIM55Q9BYV6 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 Y_RNA.245-201ENST00000364493 95 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 RNA5SP151-201ENST00000365632 117 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 RNU1-44P-201ENST00000384453 163 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 MIR301A-201ENST00000385261 86 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 RN7SKP106-201ENST00000410832 272 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 RN7SKP167-201ENST00000411047 285 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 AC005154.2-201ENST00000438110 379 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 AL360271.2-201ENST00000447710 161 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 FABP5P15-201ENST00000453566 214 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 RPS23P7-201ENST00000466210 444 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 KC877373.1-201ENST00000479066 408 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 AC068587.1-201ENST00000483613 781 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 TRBVA-201ENST00000498804 316 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 RNA5SP291-201ENST00000517222 105 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 MIR5699-201ENST00000578903 90 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 AC007687.1-201ENST00000602704 304 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 AL138721.1-201ENST00000616756 179 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 MIR6853-201ENST00000619642 74 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 MAPK10-263ENST00000641052 4307 ntBASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM55Q9BYV6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms