Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 FTLP6-201ENST00000355274 422 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 SNORD115-32-201ENST00000364079 82 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 RNU6-270P-201ENST00000364131 105 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 RNU6-541P-201ENST00000384709 110 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 MIR10A-201ENST00000385043 110 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 RNY4P18-201ENST00000391107 89 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 RNA5SP155-201ENST00000411154 129 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AL513331.1-201ENST00000411908 397 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 CYCSP10-201ENST00000417973 294 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 COX6B1P7-201ENST00000430845 235 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AL627311.1-201ENST00000431514 115 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AC074290.1-201ENST00000448883 135 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AP003385.3-201ENST00000472498 287 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 RPS4XP1-201ENST00000482189 787 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 CYCSP25-201ENST00000525280 316 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 CYCSP26-201ENST00000534107 320 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 TUG1_4.1-201ENST00000619464 181 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 MIR6811-201ENST00000620409 58 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AL121985.3-201ENST00000620690 523 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AC027506.1-201ENST00000621395 198 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 RBMY1HP-201ENST00000382759 1389 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 Z95331.1-201ENST00000623075 23112 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AL360270.2-201ENST00000562952 5985 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AC110491.1-201ENST00000562191 2010 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 RNU6-263P-201ENST00000363811 107 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 RNA5SP267-201ENST00000364893 126 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 RNA5SP211-201ENST00000365516 117 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 SNORA7A-201ENST00000384765 139 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 MIR34A-201ENST00000385130 110 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AL096829.1-201ENST00000413677 457 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AC005154.2-201ENST00000438110 379 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AC096638.1-201ENST00000444678 216 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AL357134.1-201ENST00000445848 426 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 RN7SL189P-201ENST00000468631 289 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 NIP7P2-201ENST00000485801 544 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 RN7SL655P-201ENST00000486087 298 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 Y_RNA.797-201ENST00000515977 94 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 RNU7-121P-201ENST00000516604 62 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 RN7SKP183-201ENST00000517169 324 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 RNU6-844P-201ENST00000517175 102 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AC084851.1-201ENST00000529105 249 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 BNIP3P5-201ENST00000562290 498 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AC005176.2-201ENST00000596933 147 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AC116447.1-201ENST00000613153 453 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 MIR6849-201ENST00000618543 69 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AL596275.2-206ENST00000641957 626 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AP000756.2-201ENST00000624168 2567 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AP001642.1-201ENST00000624727 2117 ntBASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.36□□□□□ -1.71
SSBP4Q9BWG4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSBP4Q9BWG4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms