Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC004552.1-201ENST00000419089 348 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 RAC1P6-201ENST00000423911 575 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 RPL7P54-201ENST00000438336 674 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 RPL26P6-201ENST00000440913 438 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC010469.1-201ENST00000463864 576 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 RPS26P3-201ENST00000470205 348 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC090543.2-201ENST00000483963 348 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 RN7SL432P-201ENST00000484057 298 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC004057.1-201ENST00000485827 348 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 ARL4AP2-201ENST00000507378 601 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC117522.1-201ENST00000509821 380 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 RNU2-58P-201ENST00000516403 183 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 SNORA74D-201ENST00000516404 141 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 Y_RNA.704-201ENST00000516851 102 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 RNU6-579P-201ENST00000516879 102 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AP003072.2-201ENST00000527756 676 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL133241.1-201ENST00000556832 487 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC025678.1-201ENST00000567861 338 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 HMGB1P6-201ENST00000569046 646 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC006270.2-201ENST00000578523 652 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 MIR5195-201ENST00000583555 115 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC067852.3-201ENST00000589177 561 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL670379.6-201ENST00000603753 252 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL670379.11-201ENST00000604059 253 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC008162.1-201ENST00000604718 254 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL670379.1-201ENST00000604752 252 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL670379.5-201ENST00000605253 252 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL670379.12-201ENST00000605291 253 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL670379.8-201ENST00000605353 252 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL670379.7-201ENST00000605823 252 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AP002360.4-201ENST00000606980 481 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL355810.1-201ENST00000614629 552 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 SDR42E1P2-201ENST00000614861 481 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC010133.1-201ENST00000615809 842 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL589994.2-201ENST00000621124 579 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 Y_RNA.248-201ENST00000364501 109 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 RNU5E-6P-201ENST00000365574 115 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 Y_RNA.450-201ENST00000384198 113 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AL359634.1-202ENST00000404721 284 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 CIR1P3-201ENST00000405137 479 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 U3.39-201ENST00000408569 239 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 RNA5SP120-201ENST00000410900 112 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 MRPL50P2-201ENST00000416821 482 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC006512.1-201ENST00000468816 291 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 RN7SL601P-201ENST00000471221 293 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC093663.1-201ENST00000497190 394 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 Y_RNA.693-201ENST00000516641 110 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 RNU6-1092P-201ENST00000516955 87 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 SNORA31.22-201ENST00000517204 135 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AL512310.1-201ENST00000548639 172 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC037471.2-201ENST00000564941 598 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC055876.1-202ENST00000567053 138 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 RPL23AP84-201ENST00000571193 464 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AP001596.2-201ENST00000608410 312 ntBASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.74□□□□□ -1.81
PAAF1Q9BRP4 AC007014.2-201ENST00000615581 479 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms