Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 SNORA62.3-201ENST00000365110 153 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 RNU6-359P-201ENST00000365466 108 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 RNU1-109P-201ENST00000383960 147 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 RNVU1-14-201ENST00000384770 164 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AL591034.1-201ENST00000407447 340 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.58□□□□□ -2
EBF4Q9BQW3 RNU6-920P-201ENST00000410926 92 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.58□□□□□ -2
EBF4Q9BQW3 NPM1P11-201ENST00000417106 855 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AL158156.1-201ENST00000422509 473 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AC010153.1-201ENST00000432862 727 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AC090774.1-201ENST00000435925 246 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.58□□□□□ -2
EBF4Q9BQW3 EPS15P1-201ENST00000448836 336 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AC021382.1-201ENST00000483523 359 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AC083906.5-201ENST00000503722 328 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AC093809.1-201ENST00000509155 340 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 SNORA70.16-201ENST00000516390 95 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AC025881.1-201ENST00000518851 512 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 DUXAP2-201ENST00000519198 589 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AC135279.1-201ENST00000543493 504 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AC103987.3-201ENST00000582071 292 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.58□□□□□ -2
EBF4Q9BQW3 VN1R92P-201ENST00000598511 928 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AC119751.7-201ENST00000600494 245 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AC105129.3-201ENST00000605455 485 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AL158211.4-201ENST00000606988 584 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 AC097468.3-201ENST00000607956 456 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 ATP5A1P2-202ENST00000616464 443 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AC000403.1-201ENST00000613696 3585 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.58□□□□□ -2
EBF4Q9BQW3 CUL1P1-201ENST00000509510 2425 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 ZNF833P-201ENST00000424938 1494 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.57□□□□□ -2
EBF4Q9BQW3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.57□□□□□ -2
EBF4Q9BQW3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.57□□□□□ -2
EBF4Q9BQW3 AC092447.10-201ENST00000620607 1652 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
EBF4Q9BQW3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
EBF4Q9BQW3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
EBF4Q9BQW3 MIR6073-201ENST00000352083 89 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.57□□□□□ -2
EBF4Q9BQW3 RNU6-853P-201ENST00000364306 107 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 RNU1-112P-201ENST00000364401 164 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 RNA5SP88-201ENST00000365560 109 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 SNORA18.3-201ENST00000384122 132 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 RNU6-114P-201ENST00000384704 105 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 MIR493-201ENST00000385254 89 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AL031577.2-201ENST00000404133 280 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 MIR320C1-201ENST00000408566 88 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.57□□□□□ -2
EBF4Q9BQW3 RNU6-1077P-201ENST00000410506 102 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.57□□□□□ -2
EBF4Q9BQW3 SEPT2P1-201ENST00000419651 180 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.57□□□□□ -2
EBF4Q9BQW3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.57□□□□□ -2
EBF4Q9BQW3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.57□□□□□ -2
EBF4Q9BQW3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.57□□□□□ -2
EBF4Q9BQW3 AC092017.2-201ENST00000427600 362 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 RPL23AP58-201ENST00000440453 469 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AL360221.1-201ENST00000445989 335 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.57□□□□□ -2
EBF4Q9BQW3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.57□□□□□ -2
EBF4Q9BQW3 KATNBL1P6-201ENST00000453433 915 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.57□□□□□ -2
EBF4Q9BQW3 AC027673.1-201ENST00000456245 405 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.57□□□□□ -2
EBF4Q9BQW3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.57□□□□□ -2
EBF4Q9BQW3 OR5BM1P-201ENST00000512021 366 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.57□□□□□ -2
EBF4Q9BQW3 MTND5P13-201ENST00000513046 1079 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.57□□□□□ -2
EBF4Q9BQW3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.57□□□□□ -2
EBF4Q9BQW3 AC087276.1-201ENST00000529659 480 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.57□□□□□ -2
EBF4Q9BQW3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.57□□□□□ -2
EBF4Q9BQW3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.57□□□□□ -2
EBF4Q9BQW3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.57□□□□□ -2
EBF4Q9BQW3 CYCSP39-201ENST00000565821 309 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AC012414.6-201ENST00000568241 401 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.57□□□□□ -2
EBF4Q9BQW3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.57□□□□□ -2
EBF4Q9BQW3 AP000811.1-201ENST00000603803 651 ntBASIC2.57□□□□□ -2
EBF4Q9BQW3 AC011451.2-201ENST00000604303 598 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms