Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.13□□□□□ -1.91
CDCA3Q99618 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.13□□□□□ -1.91
CDCA3Q99618 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDCA3Q99618 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDCA3Q99618 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.13□□□□□ -1.91
CDCA3Q99618 MED28P6-201ENST00000558776 231 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC110760.3-201ENST00000598794 467 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AL590229.1-201ENST00000603497 542 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC011468.4-201ENST00000603942 409 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC073114.1-201ENST00000612027 490 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC012150.2-201ENST00000621300 544 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC009268.2-201ENST00000621925 457 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDCA3Q99618 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDCA3Q99618 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDCA3Q99618 MTND5P27-201ENST00000428871 1720 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
CDCA3Q99618 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CDCA3Q99618 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CDCA3Q99618 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AC009812.4-201ENST00000569134 1805 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDCA3Q99618 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDCA3Q99618 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDCA3Q99618 AC073325.2-201ENST00000339545 159 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 RNY4P24-201ENST00000362735 96 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 RNU4-21P-201ENST00000362802 126 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 RNU5E-5P-201ENST00000365379 116 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDCA3Q99618 DEFB109C-201ENST00000382575 264 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 DEFB109B-201ENST00000382656 264 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 RNU6-533P-201ENST00000384144 107 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.12□□□□□ -1.91
CDCA3Q99618 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.12□□□□□ -1.91
CDCA3Q99618 AC012498.1-201ENST00000424037 437 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 DPPA2P1-201ENST00000428060 556 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AC090774.1-201ENST00000435925 246 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AL662791.1-201ENST00000441992 928 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 Z83846.1-201ENST00000446798 265 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 RPS27P29-201ENST00000463110 252 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AC114781.4-201ENST00000513707 639 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AC117532.1-201ENST00000514638 323 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 RNU6-1003P-201ENST00000517099 105 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AP000907.2-201ENST00000530827 353 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AL356057.1-201ENST00000533798 831 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.12□□□□□ -1.91
CDCA3Q99618 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.12□□□□□ -1.91
CDCA3Q99618 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.12□□□□□ -1.91
CDCA3Q99618 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.12□□□□□ -1.91
CDCA3Q99618 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.12□□□□□ -1.91
CDCA3Q99618 MIR5697-201ENST00000578045 78 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.12□□□□□ -1.91
CDCA3Q99618 MIR548AB-201ENST00000584917 84 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AC083760.1-201ENST00000589621 670 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 BDH2P1-201ENST00000602288 736 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AC012065.4-201ENST00000602445 679 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AC024153.1-201ENST00000603103 365 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 U73023.1-201ENST00000603134 700 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AP001981.2-201ENST00000603241 418 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AC007619.2-201ENST00000605743 379 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 OR10AB1P-201ENST00000609613 938 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AC004908.3-201ENST00000610248 625 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 AL591516.1-201ENST00000611326 274 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CDCA3Q99618 MIR6130-201ENST00000619419 109 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDCA3Q99618 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.12□□□□□ -1.91
CDCA3Q99618 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CDCA3Q99618 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDCA3Q99618 MTND4P4-201ENST00000439033 1366 ntBASIC3.12□□□□□ -1.91
CDCA3Q99618 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDCA3Q99618 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CDCA3Q99618 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDCA3Q99618 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.11□□□□□ -1.91
CDCA3Q99618 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.11□□□□□ -1.91
CDCA3Q99618 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDCA3Q99618 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CDCA3Q99618 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
CDCA3Q99618 Y_RNA.46-201ENST00000362695 102 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 U3.4-201ENST00000363352 213 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 RNU5E-8P-201ENST00000363502 116 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 MTND1P21-201ENST00000412991 285 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.11□□□□□ -1.91
CDCA3Q99618 AC233728.2-201ENST00000425348 757 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 MTATP6P4-201ENST00000427725 675 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.11□□□□□ -1.91
CDCA3Q99618 AC129850.1-201ENST00000436203 508 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.11□□□□□ -1.91
CDCA3Q99618 HMGB1P12-201ENST00000438594 598 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 RPL22P17-201ENST00000438729 315 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.11□□□□□ -1.91
CDCA3Q99618 TPT1P14-201ENST00000448018 505 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AL590365.1-201ENST00000450788 243 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 EEF1B2P7-201ENST00000451177 676 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AC091179.1-201ENST00000461606 579 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AC055855.1-201ENST00000489563 579 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 AC135721.1-201ENST00000497954 479 ntBASIC3.11□□□□□ -1.91
CDCA3Q99618 PCBP2P3-201ENST00000509726 843 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms