Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 RNU6-388P-201ENST00000517012 105 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 RNU6-389P-201ENST00000517048 105 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 RNU6-1183P-201ENST00000517054 60 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CITED4Q96RK1 AP004242.1-201ENST00000533701 349 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 HSPE1P20-201ENST00000538133 289 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.71□□□□□ -1.66
CITED4Q96RK1 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.71□□□□□ -1.66
CITED4Q96RK1 MIR3614-201ENST00000581261 86 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 MIR4443-201ENST00000585052 53 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.71□□□□□ -1.66
CITED4Q96RK1 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.71□□□□□ -1.66
CITED4Q96RK1 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.71□□□□□ -1.66
CITED4Q96RK1 AC005046.1-201ENST00000608515 625 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.71□□□□□ -1.66
CITED4Q96RK1 AC109309.2-201ENST00000612597 332 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 AL159153.1-201ENST00000619688 317 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 MIR6886-201ENST00000619864 61 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 AC097372.5-201ENST00000623665 376 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 SNORA17.5-201ENST00000630429 132 ntBASIC4.71□□□□□ -1.66
CITED4Q96RK1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
CITED4Q96RK1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CITED4Q96RK1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CITED4Q96RK1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CITED4Q96RK1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
CITED4Q96RK1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CITED4Q96RK1 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CITED4Q96RK1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CITED4Q96RK1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 Y_RNA.214-201ENST00000364201 112 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 RNA5SP510-201ENST00000364697 99 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 DEFB109C-201ENST00000382575 264 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 DEFB109B-201ENST00000382656 264 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 Y_RNA.471-201ENST00000384312 102 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 U3.37-201ENST00000408528 213 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 ELOCP20-201ENST00000422460 345 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 MTCO3P29-201ENST00000432119 779 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 AL645936.1-201ENST00000441979 518 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 NXT1P1-201ENST00000458481 316 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 SNORD125-201ENST00000459538 96 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC034236.1-201ENST00000469891 373 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AL132838.2-201ENST00000492041 314 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 HMGB3P16-201ENST00000508037 287 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC008958.1-201ENST00000511047 682 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 SNORA25.11-201ENST00000515935 105 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 RNU2-58P-201ENST00000516403 183 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 RN7SKP272-201ENST00000516988 232 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 SNORA31.18-201ENST00000517043 134 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC091144.1-201ENST00000519573 138 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 CASP1P1-201ENST00000526345 212 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 OR5D17P-201ENST00000531492 978 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 H3F3AP1-201ENST00000559984 334 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC090517.1-201ENST00000569307 266 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC020895.1-201ENST00000595362 272 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC068768.2-201ENST00000602352 343 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 RAC1P9-201ENST00000604990 392 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC008962.1-201ENST00000605729 304 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 FTX_3.1-201ENST00000610451 147 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 MIR6768-201ENST00000610734 72 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC107871.2-201ENST00000612894 502 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 AC103858.2-201ENST00000621471 543 ntBASIC4.7□□□□□ -1.66
CITED4Q96RK1 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CITED4Q96RK1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CITED4Q96RK1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CITED4Q96RK1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CITED4Q96RK1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CITED4Q96RK1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CITED4Q96RK1 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CITED4Q96RK1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CITED4Q96RK1 FAM35BP-202ENST00000497389 3337 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CITED4Q96RK1 A2MP1-204ENST00000566278 4130 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CITED4Q96RK1 AC118273.1-201ENST00000525324 3006 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CITED4Q96RK1 Y_RNA.19-201ENST00000362462 99 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 RNU1-108P-201ENST00000362556 161 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 Y_RNA.64-201ENST00000362845 102 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 RNA5SP375-201ENST00000362975 119 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 RNU6-379P-201ENST00000363813 104 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 RNU6-898P-201ENST00000365627 104 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 OR1L6-202ENST00000373684 1044 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 Y_RNA.489-201ENST00000384410 101 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CITED4Q96RK1 Y_RNA.592-201ENST00000410274 109 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 RNU6-847P-201ENST00000411115 108 ntBASIC4.69□□□□□ -1.66
CITED4Q96RK1 RNA5SP31-201ENST00000411144 127 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms