Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 UBE2FP1-201ENST00000416536 447 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AL645937.1-202ENST00000421799 937 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 SAR1AP4-201ENST00000429225 591 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AL589823.1-201ENST00000429577 183 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AL353706.1-201ENST00000436728 494 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 RPL23AP58-201ENST00000440453 469 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 COX6CP12-201ENST00000446748 202 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 Z75741.1-201ENST00000446793 314 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC109925.1-201ENST00000478069 331 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC135721.1-201ENST00000497954 479 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 RAC1P5-201ENST00000512182 576 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC091965.2-201ENST00000512324 613 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 Y_RNA.655-201ENST00000515919 96 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC068587.4-201ENST00000533893 186 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 PCMTD1P2-201ENST00000565017 355 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 TPMTP1-201ENST00000592307 737 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC146944.4-201ENST00000602697 718 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AP000403.1-201ENST00000603349 851 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC097468.3-201ENST00000607956 456 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 AC093831.2-201ENST00000624393 3427 ntBASIC3.09□□□□□ -1.91
PDLIM5Q96HC4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.09□□□□□ -1.92
PDLIM5Q96HC4 AC092104.1-201ENST00000497346 1441 ntBASIC3.09□□□□□ -1.92
PDLIM5Q96HC4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.09□□□□□ -1.92
PDLIM5Q96HC4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 PABPC1P9-201ENST00000426076 1612 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 Y_RNA.194-201ENST00000363985 102 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 RNU6-501P-201ENST00000364072 100 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 Y_RNA.553-201ENST00000384670 102 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 SNORA46-201ENST00000384762 135 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 MIR1305-201ENST00000408300 86 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 RN7SKP140-201ENST00000411196 284 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC007899.1-201ENST00000412776 775 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AL445669.1-201ENST00000426743 755 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC092017.2-201ENST00000427600 362 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 DLGAP5P1-201ENST00000430307 464 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 MTCO3P5-201ENST00000433620 714 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 PIGFP3-201ENST00000441918 722 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 MTCO1P19-201ENST00000443487 500 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 COX6CP2-201ENST00000444980 225 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 MTCO2P7-201ENST00000446518 666 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AP000542.1-201ENST00000448473 371 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 RNU7-23P-201ENST00000459465 62 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 RPS20P22-201ENST00000473700 357 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC116337.2-201ENST00000477662 156 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 RN7SL283P-201ENST00000489055 303 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC010424.1-201ENST00000506336 297 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC022447.3-201ENST00000506865 495 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 ARL4AP2-201ENST00000507378 601 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 POU5F1P7-201ENST00000508759 541 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 Y_RNA.695-201ENST00000516715 107 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC091489.2-201ENST00000566263 604 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 RSL24D1P11-201ENST00000591045 491 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC008739.3-201ENST00000603262 127 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AL136363.1-201ENST00000605349 337 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC239868.4-201ENST00000608318 671 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC019176.2-201ENST00000611579 315 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 SDR42E1P2-201ENST00000614861 481 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 AC092140.2-201ENST00000618027 521 ntBASIC3.08□□□□□ -1.92
PDLIM5Q96HC4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms