Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
IFT43Q96FT9 AC126323.6-202ENST00000568092 3511 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
IFT43Q96FT9 Y_RNA.26-201ENST00000362539 101 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 RNA5SP443-201ENST00000363083 132 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 RN7SKP113-201ENST00000363891 295 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 RNY3P11-201ENST00000364153 102 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 RNU6-398P-201ENST00000384143 109 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 SNORA51.8-201ENST00000384234 132 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 RNU6-933P-201ENST00000384424 107 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 MIR153-1-201ENST00000384914 90 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 AL078599.1-201ENST00000402075 293 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 AL035079.1-201ENST00000405210 287 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 MIR1182-201ENST00000408363 97 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 DDX39BP1-205ENST00000422507 192 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 AL451062.2-201ENST00000427515 271 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 AC009238.2-201ENST00000431026 355 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 OR2AQ1P-201ENST00000451972 200 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 AC022795.1-201ENST00000473808 480 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 HMGB1P35-201ENST00000503360 598 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 APOOP4-201ENST00000513530 597 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 Y_RNA.687-201ENST00000516558 91 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 IGKV2D-23-201ENST00000518179 286 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 AC006349.1-201ENST00000555526 235 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 AC130454.1-201ENST00000622948 401 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 FP236240.3-201ENST00000623061 327 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 AL512643.1-201ENST00000635735 524 ntBASIC5.21□□□□□ -1.58
IFT43Q96FT9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
IFT43Q96FT9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
IFT43Q96FT9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
IFT43Q96FT9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
IFT43Q96FT9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 RNA5SP52-201ENST00000362448 134 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 RNU6-806P-201ENST00000365147 105 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
IFT43Q96FT9 SNORA36C-201ENST00000384289 132 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 SNORA51.11-201ENST00000384442 131 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 RNU6-1179P-201ENST00000384667 107 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 Y_RNA.555-201ENST00000384673 110 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 MTCO3P19-201ENST00000415864 321 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 AC119751.6-201ENST00000416712 186 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
IFT43Q96FT9 AC006946.1-201ENST00000429106 328 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 RPL26P6-201ENST00000440913 438 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 RANP8-201ENST00000444720 713 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
IFT43Q96FT9 RN7SL443P-201ENST00000464331 290 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 AL671862.1-201ENST00000515851 349 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 RNU6-927P-201ENST00000516199 100 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 RN7SKP147-201ENST00000517154 244 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 TRAV32-201ENST00000553993 340 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 AL049839.1-201ENST00000556151 657 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 Mico1.1-201ENST00000611698 204 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 AL159153.1-201ENST00000619688 317 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 AC063976.2-201ENST00000425667 3556 ntBASIC5.2□□□□□ -1.58
IFT43Q96FT9 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
IFT43Q96FT9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
IFT43Q96FT9 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
IFT43Q96FT9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
IFT43Q96FT9 MIR585-201ENST00000384887 94 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 AL513475.1-201ENST00000406602 315 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 RPL36AP10-201ENST00000421785 322 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 PIGPP3-201ENST00000425307 415 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 KNOP1P3-201ENST00000446933 426 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 RPS3AP46-201ENST00000448352 682 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 TRBVB-201ENST00000477100 408 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 SUMO2P6-201ENST00000505273 288 ntBASIC5.19□□□□□ -1.58
IFT43Q96FT9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
IFT43Q96FT9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.19□□□□□ -1.58
IFT43Q96FT9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms