Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 CKS1BP3-201ENST00000600888 237 ntBASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 AC068790.3-201ENST00000602988 553 ntBASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 PRELID3BP8-201ENST00000604148 295 ntBASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 AC007038.2-201ENST00000608095 740 ntBASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 AL355472.4-201ENST00000610233 626 ntBASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 MIR3670-4-201ENST00000612260 65 ntBASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 AC010133.1-201ENST00000615809 842 ntBASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 AC010297.1-201ENST00000623948 149 ntBASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 AC097655.1-201ENST00000635075 318 ntBASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 FO624990.1-201ENST00000636373 85 ntBASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 OR4G2P-202ENST00000641004 1759 ntBASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
RPUSD4Q96CM3 AL035425.3-201ENST00000564206 4996 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC091564.4-201ENST00000533934 2194 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 RNA5SP393-201ENST00000363423 117 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 RNU6-799P-201ENST00000363567 107 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 RNU6-553P-201ENST00000364047 96 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 SNORD15B-201ENST00000384714 146 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 MIR181A2-201ENST00000384863 110 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 U8.14-201ENST00000390843 143 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AL356057.2-201ENST00000403318 432 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 TXNP7-201ENST00000406296 293 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 RNU2-33P-201ENST00000410344 192 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 RPL17P12-201ENST00000413391 526 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AL389915.1-201ENST00000422463 466 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AL353777.1-201ENST00000425552 326 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 RPL7L1P10-201ENST00000427790 463 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC097713.2-201ENST00000430199 356 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 GDI2P2-201ENST00000445131 608 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AP000852.1-201ENST00000472460 573 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 RN7SL293P-201ENST00000481765 281 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC103975.1-201ENST00000482506 483 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AL049874.1-201ENST00000489560 388 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 RPS15AP36-201ENST00000492022 382 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 DSTNP2-201ENST00000504533 515 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC006445.2-201ENST00000510061 472 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 RNU6-232P-201ENST00000517144 64 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 ATP5F1P5-201ENST00000526403 760 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 TRAV28-201ENST00000557548 323 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC145350.1-201ENST00000567426 208 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 MIR4293-201ENST00000584305 78 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 TPMTP1-201ENST00000592307 737 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 NIFKP6-201ENST00000598115 845 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 MTCYBP22-201ENST00000603788 447 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AL357094.1-201ENST00000603845 844 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 SDR42E1P2-201ENST00000614861 481 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 AL603755.1-201ENST00000619504 163 ntBASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.34□□□□□ -2.03
RPUSD4Q96CM3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
RPUSD4Q96CM3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
RPUSD4Q96CM3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 MTCO1P12-201ENST00000414273 1543 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 Y_RNA.126-201ENST00000363382 111 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 RNU6-1284P-201ENST00000363701 100 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 CCNG1P1-201ENST00000406783 885 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 RPL7P8-201ENST00000411964 730 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 UBE2FP1-201ENST00000416536 447 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 AL365184.2-201ENST00000431139 435 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 RPS29P6-201ENST00000438196 145 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 Z82210.1-201ENST00000440037 231 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 PIGFP3-201ENST00000441918 722 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 BMI1P1-201ENST00000445879 941 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 ELOCP30-201ENST00000447108 299 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 AC020550.1-201ENST00000447385 163 ntBASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.33□□□□□ -2.04
RPUSD4Q96CM3 ART2BP-201ENST00000453501 499 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms