Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.19□□□□□ -2.22
TTC28Q96AY4 AC090517.3-201ENST00000625170 141 ntBASIC1.19□□□□□ -2.22
TTC28Q96AY4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TTC28Q96AY4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.19□□□□□ -2.22
TTC28Q96AY4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TTC28Q96AY4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TTC28Q96AY4 Y_RNA.280-201ENST00000364765 112 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 AC244098.2-201ENST00000422068 99 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 WARS2P1-201ENST00000429678 537 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 AC089999.1-201ENST00000460336 374 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.18□□□□□ -2.22
TTC28Q96AY4 RPS29P20-201ENST00000489592 171 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.18□□□□□ -2.22
TTC28Q96AY4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TTC28Q96AY4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.18□□□□□ -2.22
TTC28Q96AY4 AC074029.2-201ENST00000551045 634 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 U73023.1-201ENST00000603134 700 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 AC006338.1-201ENST00000618453 749 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 AL157700.1-201ENST00000561973 1432 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TTC28Q96AY4 RNU1-148P-201ENST00000384472 162 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.18□□□□□ -2.22
TTC28Q96AY4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.18□□□□□ -2.22
TTC28Q96AY4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TTC28Q96AY4 PTGES3P5-201ENST00000455109 434 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 RNU7-27P-201ENST00000459281 62 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.18□□□□□ -2.22
TTC28Q96AY4 RNU6-319P-201ENST00000516025 108 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.18□□□□□ -2.22
TTC28Q96AY4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.18□□□□□ -2.22
TTC28Q96AY4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.18□□□□□ -2.22
TTC28Q96AY4 AC004808.1-201ENST00000627671 721 ntBASIC1.18□□□□□ -2.22
TTC28Q96AY4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TTC28Q96AY4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 RNU6-72P-201ENST00000384285 79 ntBASIC1.17□□□□□ -2.22
TTC28Q96AY4 AC073264.1-201ENST00000411508 416 ntBASIC1.17□□□□□ -2.22
TTC28Q96AY4 AC000111.3-201ENST00000433478 193 ntBASIC1.17□□□□□ -2.22
TTC28Q96AY4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 AC111000.5-201ENST00000506559 1178 ntBASIC1.17□□□□□ -2.22
TTC28Q96AY4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 PRELID2P1-201ENST00000552837 301 ntBASIC1.17□□□□□ -2.22
TTC28Q96AY4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 AL391834.1-201ENST00000609609 560 ntBASIC1.17□□□□□ -2.22
TTC28Q96AY4 AL589935.2-201ENST00000616471 1231 ntBASIC1.17□□□□□ -2.22
TTC28Q96AY4 DBF4P1-201ENST00000412976 1892 ntBASIC1.17□□□□□ -2.22
TTC28Q96AY4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
TTC28Q96AY4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
TTC28Q96AY4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TTC28Q96AY4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.17□□□□□ -2.22
TTC28Q96AY4 AC139769.3-201ENST00000618383 175 ntBASIC1.17□□□□□ -2.22
TTC28Q96AY4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TTC28Q96AY4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TTC28Q96AY4 MTND4P34-201ENST00000572715 1371 ntBASIC1.17□□□□□ -2.22
TTC28Q96AY4 MIRLET7G-201ENST00000362280 84 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 FCF1P2-201ENST00000415284 583 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 HSPE1P1-201ENST00000421494 318 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 MTND2P9-201ENST00000422293 931 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.16□□□□□ -2.22
TTC28Q96AY4 JTBP1-201ENST00000441314 247 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 RPL9P9-202ENST00000466501 579 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 SNORA31.26-201ENST00000517250 137 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.16□□□□□ -2.22
TTC28Q96AY4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.16□□□□□ -2.22
TTC28Q96AY4 AL512605.2-201ENST00000592972 256 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 SNRPGP15-201ENST00000600149 222 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 MIR6857-201ENST00000613267 93 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 AC011890.2-201ENST00000613393 294 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 RMST_5.1-201ENST00000618704 126 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 AP003072.5-201ENST00000623872 773 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 AC011477.1-204ENST00000623416 1325 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 RNA5SP465-201ENST00000391195 109 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 RNU1-78P-201ENST00000391248 165 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 AP000567.1-201ENST00000406413 156 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.16□□□□□ -2.22
TTC28Q96AY4 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TTC28Q96AY4 MTND5P4-201ENST00000514978 288 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.16□□□□□ -2.22
TTC28Q96AY4 BX322635.1-201ENST00000605804 496 ntBASIC1.16□□□□□ -2.22
TTC28Q96AY4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.16□□□□□ -2.22
TTC28Q96AY4 MIR591-201ENST00000385290 95 ntBASIC1.15□□□□□ -2.22
TTC28Q96AY4 RNU11-5P-201ENST00000391216 129 ntBASIC1.15□□□□□ -2.22
TTC28Q96AY4 AL357078.2-201ENST00000416486 427 ntBASIC1.15□□□□□ -2.22
TTC28Q96AY4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.15□□□□□ -2.22
TTC28Q96AY4 AC244035.1-201ENST00000430042 390 ntBASIC1.15□□□□□ -2.22
TTC28Q96AY4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.15□□□□□ -2.22
TTC28Q96AY4 AC104472.2-201ENST00000469035 601 ntBASIC1.15□□□□□ -2.22
TTC28Q96AY4 AC093852.1-201ENST00000503587 266 ntBASIC1.15□□□□□ -2.22
TTC28Q96AY4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.15□□□□□ -2.22
TTC28Q96AY4 AP004242.1-201ENST00000533701 349 ntBASIC1.15□□□□□ -2.22
TTC28Q96AY4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.15□□□□□ -2.22
TTC28Q96AY4 OR6C73P-201ENST00000546432 358 ntBASIC1.15□□□□□ -2.22
TTC28Q96AY4 AL161912.3-201ENST00000605404 628 ntBASIC1.15□□□□□ -2.22
TTC28Q96AY4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms