Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MTND1P28-201ENST00000435623 950 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 RPL23AP58-201ENST00000440453 469 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 ATP5C1P1-201ENST00000441945 895 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 EPS15P1-201ENST00000448836 336 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 RAB9AP1-201ENST00000449393 573 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 RN7SL601P-201ENST00000471221 293 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 DSTNP2-201ENST00000504533 515 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AF131216.2-201ENST00000512316 564 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC128657.1-201ENST00000549459 145 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC098826.3-201ENST00000603823 466 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AL161798.1-201ENST00000604630 131 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC012360.2-201ENST00000609349 391 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC091953.2-201ENST00000623979 160 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC068057.2-201ENST00000624047 895 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 OR1S2-201ENST00000302592 978 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 RNU5E-5P-201ENST00000365379 116 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 RNA5SP354-201ENST00000391247 136 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AL139397.2-201ENST00000404529 772 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AL353678.1-201ENST00000422735 741 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 OR2AS1P-201ENST00000427827 319 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC092641.1-201ENST00000440229 772 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 CYCSP32-201ENST00000440548 321 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 SSXP1-201ENST00000453640 473 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 RPL12P25-201ENST00000455592 494 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 RN7SL432P-201ENST00000484057 298 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC106707.2-201ENST00000484182 374 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 RPS27P26-201ENST00000494583 239 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 APOOP4-201ENST00000513530 597 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AP006587.4-201ENST00000526053 529 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC011979.2-201ENST00000527568 352 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AL359212.1-201ENST00000556608 614 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC135628.1-201ENST00000568867 534 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 MIR3118-1-201ENST00000581787 76 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 ELOCP35-201ENST00000604289 336 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AL162713.1-201ENST00000604480 262 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC008498.1-201ENST00000613012 531 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC027807.2-201ENST00000616099 408 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 AC009878.1-201ENST00000621819 340 ntBASIC3.1□□□□□ -1.91
VPS33AQ96AX1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.1□□□□□ -1.91
VPS33AQ96AX1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 RNY4P16-201ENST00000364768 94 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 MIR767-201ENST00000390228 109 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 FCF1P10-201ENST00000407590 479 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 RN7SKP58-201ENST00000411010 305 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 RAB28P1-201ENST00000411517 641 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AC104651.1-201ENST00000427559 735 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 KATNBL1P6-201ENST00000453433 915 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 SNRPFP4-201ENST00000456366 242 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 RPL26P9-201ENST00000457466 433 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 MTCO2P6-201ENST00000463134 685 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 AC098862.1-201ENST00000504991 413 ntBASIC3.09□□□□□ -1.91
VPS33AQ96AX1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms