Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.18□□□□□ -1.74
HPS3Q969F9 AL133383.2-201ENST00000622958 2336 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HPS3Q969F9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HPS3Q969F9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HPS3Q969F9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HPS3Q969F9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HPS3Q969F9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HPS3Q969F9 MTND5P17-201ENST00000418405 1603 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
HPS3Q969F9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HPS3Q969F9 HSPA8P1-201ENST00000425843 1833 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 RNU6-179P-201ENST00000363350 107 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 RNU6-701P-201ENST00000384059 107 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 MIR454-201ENST00000390180 115 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HPS3Q969F9 HSPE1P8-201ENST00000406997 288 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.17□□□□□ -1.74
HPS3Q969F9 OR51A5P-201ENST00000415429 942 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 AC000111.3-201ENST00000433478 193 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 MTATP6P16-201ENST00000434543 526 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.17□□□□□ -1.74
HPS3Q969F9 VN1R34P-201ENST00000447387 883 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 RNU7-63P-201ENST00000459054 62 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 MTCO3P38-201ENST00000468910 766 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
HPS3Q969F9 AC092989.1-201ENST00000481235 277 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.17□□□□□ -1.74
HPS3Q969F9 RNU6-1281P-201ENST00000516223 105 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 SNORD27.1-201ENST00000516319 72 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 Y_RNA.704-201ENST00000516851 102 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 AK6P1-201ENST00000540219 478 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.17□□□□□ -1.74
HPS3Q969F9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HPS3Q969F9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HPS3Q969F9 AL133241.1-201ENST00000556832 487 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.17□□□□□ -1.74
HPS3Q969F9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.17□□□□□ -1.74
HPS3Q969F9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.17□□□□□ -1.74
HPS3Q969F9 AC244505.7-201ENST00000599675 272 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 AC006133.1-201ENST00000617106 264 ntBASIC4.17□□□□□ -1.74
HPS3Q969F9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.17□□□□□ -1.74
HPS3Q969F9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HPS3Q969F9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HPS3Q969F9 RNU6-188P-201ENST00000364207 107 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 RNU6-483P-201ENST00000384088 108 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 SDCBPP3-201ENST00000419629 891 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HPS3Q969F9 AL356867.1-201ENST00000429623 299 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.16□□□□□ -1.74
HPS3Q969F9 RPS15AP9-201ENST00000439856 381 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AL356010.1-201ENST00000456364 102 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 RNU7-182P-201ENST00000459009 62 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AC006512.1-201ENST00000468816 291 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AC083798.1-201ENST00000472671 131 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.16□□□□□ -1.74
HPS3Q969F9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.16□□□□□ -1.74
HPS3Q969F9 AL049874.1-201ENST00000489560 388 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.16□□□□□ -1.74
HPS3Q969F9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.16□□□□□ -1.74
HPS3Q969F9 RNU1-45P-201ENST00000517191 141 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AC092325.1-201ENST00000566449 554 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AC068135.2-201ENST00000569293 1028 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.16□□□□□ -1.74
HPS3Q969F9 MIR3158-1-201ENST00000583596 81 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AL162413.1-201ENST00000603198 110 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AC010591.1-201ENST00000603941 649 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.16□□□□□ -1.74
HPS3Q969F9 AC103710.3-201ENST00000608157 948 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AC093788.1-201ENST00000609356 927 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.16□□□□□ -1.74
HPS3Q969F9 AC007998.5-201ENST00000622938 237 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.16□□□□□ -1.74
HPS3Q969F9 U6.114-201ENST00000636407 96 ntBASIC4.16□□□□□ -1.74
HPS3Q969F9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HPS3Q969F9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HPS3Q969F9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HPS3Q969F9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
HPS3Q969F9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HPS3Q969F9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.15□□□□□ -1.74
HPS3Q969F9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.15□□□□□ -1.74
HPS3Q969F9 RNU1-18P-201ENST00000363062 164 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 RN7SKP140-201ENST00000411196 284 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 CRYBB2P1-203ENST00000415709 538 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 RPL21P109-201ENST00000422213 475 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 AC006946.1-201ENST00000429106 328 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 AL606489.2-201ENST00000433886 234 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.15□□□□□ -1.75
HPS3Q969F9 AC020550.1-201ENST00000447385 163 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 RNU6-261P-201ENST00000459506 102 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 VN1R17P-201ENST00000472048 1090 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 MTAPP1-201ENST00000489154 819 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.15□□□□□ -1.75
HPS3Q969F9 AC105417.1-201ENST00000514691 285 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 SNORA67.7-201ENST00000516664 135 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 RN7SKP258-201ENST00000517151 304 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 OR5BN1P-201ENST00000532955 829 ntBASIC4.15□□□□□ -1.75
HPS3Q969F9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms