Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.24□□□□□ -1.89
TM9SF4Q92544 U6atac.1-201ENST00000616025 117 ntBASIC3.24□□□□□ -1.89
TM9SF4Q92544 AC072046.2-201ENST00000618366 268 ntBASIC3.24□□□□□ -1.89
TM9SF4Q92544 AL158209.2-201ENST00000619266 216 ntBASIC3.24□□□□□ -1.89
TM9SF4Q92544 AC022149.2-201ENST00000621061 203 ntBASIC3.24□□□□□ -1.89
TM9SF4Q92544 CR381572.1-201ENST00000625098 102 ntBASIC3.24□□□□□ -1.89
TM9SF4Q92544 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
TM9SF4Q92544 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TM9SF4Q92544 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM9SF4Q92544 AC092326.2-201ENST00000624772 1561 ntBASIC3.24□□□□□ -1.89
TM9SF4Q92544 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM9SF4Q92544 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.24□□□□□ -1.89
TM9SF4Q92544 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM9SF4Q92544 AC009902.3-201ENST00000606235 2172 ntBASIC3.24□□□□□ -1.89
TM9SF4Q92544 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC011460.1-201ENST00000636268 1834 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC091152.2-201ENST00000591628 2569 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TM9SF4Q92544 MFSD8-233ENST00000641482 4860 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 RNU6-600P-201ENST00000362524 99 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 SNORA51.2-201ENST00000364595 132 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 RNU6-282P-201ENST00000365357 103 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TM9SF4Q92544 RNU6-780P-201ENST00000391030 104 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 MTND1P21-201ENST00000412991 285 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 MTND3P17-201ENST00000416968 344 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 MTCYBP5-201ENST00000423752 1135 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC003071.1-201ENST00000451219 789 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 RN7SL442P-201ENST00000473804 320 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC025518.1-201ENST00000479856 347 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC004924.1-201ENST00000480160 781 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 RPS3AP14-201ENST00000483907 780 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 RNU6-718P-201ENST00000516166 105 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 SNORA70.18-201ENST00000516696 98 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TM9SF4Q92544 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 MIR3682-201ENST00000581338 84 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC012669.1-201ENST00000603209 283 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 AL590282.1-201ENST00000610379 1136 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC090517.2-201ENST00000614966 680 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC002550.2-201ENST00000621246 394 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 CR381653.2-201ENST00000624041 768 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 AL159972.1-201ENST00000625150 448 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 LRRC77P-213ENST00000637727 880 ntBASIC3.23□□□□□ -1.89
TM9SF4Q92544 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TM9SF4Q92544 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TM9SF4Q92544 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.23□□□□□ -1.89
TM9SF4Q92544 AC116096.1-201ENST00000566804 2314 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 AC007256.1-201ENST00000392253 2765 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 Y_RNA.296-201ENST00000364930 108 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 RNU6-1283P-201ENST00000365314 105 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 RPL23AP32-201ENST00000395315 459 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 CALM2P3-201ENST00000400429 449 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 GSTA9P-201ENST00000406231 611 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 AC017079.2-201ENST00000416102 485 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 MTND1P23-201ENST00000416931 372 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 EIF1P1-201ENST00000421436 341 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 UBE2V1P8-201ENST00000437166 265 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 ARPC3P1-201ENST00000437218 533 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 SETP5-201ENST00000437270 562 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 HMGB1P12-201ENST00000438594 598 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 AL662791.1-201ENST00000441992 928 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 TPT1P14-201ENST00000448018 505 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 C1DP4-201ENST00000455429 424 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 AL359385.1-201ENST00000456509 365 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 snoU109.4-201ENST00000458953 143 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 AC008155.2-201ENST00000464337 397 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 KCTD9P5-201ENST00000504141 1170 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 AC010587.1-201ENST00000505809 469 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 RNU6-314P-201ENST00000516574 104 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 RNU6-528P-201ENST00000516926 100 ntBASIC3.22□□□□□ -1.89
TM9SF4Q92544 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.22□□□□□ -1.89
TM9SF4Q92544 AL845331.3-202ENST00000562856 261 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms