Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC008127.2-201ENST00000549925 1075 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC021749.1-201ENST00000604322 607 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 snoU13.31-201ENST00000607291 104 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 RNU6-457P-201ENST00000363999 107 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 SNORA51.6-201ENST00000384151 125 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AL121978.1-201ENST00000402778 359 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 RNA5SP338-201ENST00000410495 85 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AL161449.1-201ENST00000414531 1199 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 Z75741.2-201ENST00000417272 1167 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC004865.1-201ENST00000442276 1003 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AL591719.1-201ENST00000444669 744 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 ZNF886P-201ENST00000450781 723 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 RPS20P24-201ENST00000457473 361 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 HSPE1P23-201ENST00000509838 286 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC104057.1-201ENST00000515547 497 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 RNY4P37-201ENST00000516225 96 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 MTND4P33-201ENST00000556706 766 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC012182.1-201ENST00000570133 895 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC025588.3-201ENST00000604182 274 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC010738.1-201ENST00000604970 987 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC087683.2-201ENST00000611384 326 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC009159.2-201ENST00000617603 606 ntBASIC2.09□□□□□ -2.07
SHROOM3Q8TF72 AC130650.2-201ENST00000618736 2403 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AC016716.1-201ENST00000265882 708 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 SNORD116.1-201ENST00000365628 92 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 Y_RNA.540-201ENST00000384638 111 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AL590084.1-201ENST00000407885 387 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 RNU6-584P-201ENST00000410350 95 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 CYCSP49-201ENST00000420810 319 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AC023424.2-201ENST00000493479 777 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AC020699.1-201ENST00000505161 445 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AC005832.3-201ENST00000537929 631 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 MIR4504-201ENST00000577413 92 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AC090116.1-201ENST00000615679 446 ntBASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SHROOM3Q8TF72 AC107982.1-201ENST00000507171 1300 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 HIGD1AP15-201ENST00000416198 280 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 MRPS36P1-201ENST00000421291 307 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 RPS26P56-201ENST00000444468 240 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 MTCO1P48-201ENST00000448024 1096 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AC104308.1-201ENST00000454621 333 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AC005840.1-201ENST00000498412 377 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 SNORA31.11-201ENST00000516528 139 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 RNA5SP480-201ENST00000516840 109 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AC087808.1-201ENST00000520501 361 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 OR8K4P-201ENST00000534608 872 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 OR6C73P-201ENST00000546432 358 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AGGF1P5-201ENST00000567900 919 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 AC068790.3-201ENST00000602988 553 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 RNA5SP108-201ENST00000605921 117 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 U73479.1-201ENST00000618062 168 ntBASIC2.08□□□□□ -2.08
SHROOM3Q8TF72 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms