Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL592494.3-201ENST00000609485 464 ntBASIC0.95□□□□□ -2.26
ALMS1Q8TCU4 AP001486.3-201ENST00000615334 372 ntBASIC0.95□□□□□ -2.26
ALMS1Q8TCU4 RNU6-335P-201ENST00000364563 113 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 SNORD56-201ENST00000413522 71 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 HMGB1P49-201ENST00000418882 569 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 ARF4P4-201ENST00000439608 520 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 MIR3618-201ENST00000580330 88 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AC110079.1-202ENST00000635213 138 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 MKKS-204ENST00000639674 192 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 MIR150-201ENST00000385048 84 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 RNA5SP105-201ENST00000391123 113 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AC244033.1-201ENST00000426826 870 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 Y_RNA.675-201ENST00000516389 149 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 MIR6076-201ENST00000617521 113 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 RNU4-7P-201ENST00000364758 141 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AC013268.2-201ENST00000420753 337 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AC109471.1-201ENST00000511631 612 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AC093752.1-206ENST00000511823 336 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 FAM106DP-201ENST00000586416 501 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 AL590099.1-201ENST00000615276 138 ntBASIC0.94□□□□□ -2.26
ALMS1Q8TCU4 RNU6-1105P-201ENST00000384774 107 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 CKS1BP5-201ENST00000434172 273 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 ERHP1-201ENST00000523006 310 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AL355816.1-201ENST00000607951 118 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 RNU6-516P-201ENST00000411381 104 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 RPS15AP34-201ENST00000487776 387 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC004241.3-201ENST00000611728 517 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 CYCSP33-201ENST00000414485 327 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC108078.1-201ENST00000508073 725 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC105914.1-201ENST00000511798 226 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 OR4V1P-201ENST00000525394 1140 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 CASP1P1-201ENST00000526345 212 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 ZNF90P2-204ENST00000419323 1075 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 MIR1273G-201ENST00000577677 100 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC004908.2-201ENST00000609090 574 ntBASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.93□□□□□ -2.26
ALMS1Q8TCU4 AC074117.2-201ENST00000417130 397 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 HAR1A.1-201ENST00000459583 118 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC010301.1-201ENST00000473936 355 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC008739.2-201ENST00000597006 317 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 7SK.7-201ENST00000603504 247 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 MIR98-201ENST00000606724 119 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AL445669.1-201ENST00000426743 755 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC108059.3-201ENST00000456388 214 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 snoU13.3-201ENST00000459441 104 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 RPL31P58-201ENST00000469001 379 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AL121769.1-201ENST00000469473 401 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 COX6CP14-201ENST00000469580 174 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC114801.2-201ENST00000503825 781 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC020699.1-201ENST00000505161 445 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC008885.2-201ENST00000509506 930 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 SUB1P4-201ENST00000566062 339 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC020658.4-201ENST00000613987 684 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC091965.2-201ENST00000512324 613 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 RNU6-113P-201ENST00000516653 101 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 MTCYBP41-201ENST00000528913 1123 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AC112191.3-201ENST00000604371 277 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 AL445493.3-201ENST00000619568 477 ntBASIC0.92□□□□□ -2.26
ALMS1Q8TCU4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AC244098.2-201ENST00000422068 99 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AC097493.1-201ENST00000463958 372 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms