Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 RNU6-831P-201ENST00000384548 107 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 MIR1183-201ENST00000408856 89 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 RNA5SP129-201ENST00000410276 118 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 RNA5SP306-201ENST00000411087 107 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 HMGN1P24-201ENST00000412282 298 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 MTCO1P39-201ENST00000426148 480 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AL359073.1-201ENST00000448036 403 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 RPS17P13-201ENST00000448974 407 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC073415.1-201ENST00000449240 153 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 PPP1R2P5-201ENST00000457256 603 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC007547.1-201ENST00000462177 490 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC130509.1-201ENST00000464158 433 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 MTND4P17-201ENST00000470444 350 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC055855.1-201ENST00000489563 579 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AP001086.1-201ENST00000494882 321 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 HSPD1P15-201ENST00000505573 1122 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 TTC39CP1-201ENST00000512513 755 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 RNU6-1170P-201ENST00000515974 106 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 RN7SKP256-201ENST00000517201 314 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AP003497.1-201ENST00000528472 562 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 SNRPGP17-201ENST00000603780 214 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC012443.1-201ENST00000605605 231 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 RNU6-89P-201ENST00000606519 100 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AL021997.2-201ENST00000615674 271 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 uc_338.13-201ENST00000618243 179 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC079684.1-201ENST00000621405 437 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AL133216.2-202ENST00000634512 349 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 AC008013.2-202ENST00000637965 364 ntBASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIMC1Q8NDZ2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.03□□□□□ -1.77
SIMC1Q8NDZ2 AL158163.1-201ENST00000603915 1649 ntBASIC4.03□□□□□ -1.77
SIMC1Q8NDZ2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.03□□□□□ -1.77
SIMC1Q8NDZ2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 RNU1-15P-201ENST00000353977 144 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 MIR369-201ENST00000362155 70 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 RNU6-254P-201ENST00000363377 107 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 Y_RNA.422-201ENST00000384054 114 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 RNU1-89P-201ENST00000384592 164 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 MIR135A2-201ENST00000384854 100 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 SNORA11F-201ENST00000408237 128 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 ERLEC1P1-201ENST00000433806 578 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 CYCSP43-201ENST00000438233 310 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 MTND3P2-201ENST00000438452 342 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 GTF2IP13-201ENST00000438487 386 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 ABCF2P2-201ENST00000450549 296 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 Y_RNA.639-201ENST00000458981 102 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 GMFBP1-201ENST00000467831 427 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 AC106785.1-201ENST00000565935 262 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 OR4K8P-201ENST00000578842 1048 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 UBE2L4-201ENST00000587688 464 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 AC106900.2-201ENST00000604994 317 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 AL353748.2-201ENST00000622148 471 ntBASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SIMC1Q8NDZ2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
SIMC1Q8NDZ2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.01□□□□□ -1.77
SIMC1Q8NDZ2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms