Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL138799.3-201ENST00000438968 350 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC006512.1-201ENST00000468816 291 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC126389.1-201ENST00000477436 290 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 SNORD27.1-201ENST00000516319 72 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 RNU7-143P-201ENST00000516781 65 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 RNU6-835P-201ENST00000516974 104 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC090151.1-201ENST00000520784 730 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC100870.1-201ENST00000522035 505 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AF235103.2-201ENST00000525753 346 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC123904.3-201ENST00000547218 814 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 HIF1AP1-201ENST00000553642 175 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC005730.3-201ENST00000583067 366 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 MIR4293-201ENST00000584305 78 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 BNIP3P30-201ENST00000601184 574 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 HMGN2P28-201ENST00000606102 262 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 DISC2.1-201ENST00000612827 205 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AL354950.2-201ENST00000617939 290 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 MIR4727-201ENST00000622232 55 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AP003122.6-201ENST00000623831 495 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC006386.2-201ENST00000624491 75 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 AC012005.1-201ENST00000624575 75 ntBASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SMC1BQ8NDV3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 RNU6-1284P-201ENST00000363701 100 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 MIR454-201ENST00000390180 115 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AC012498.1-201ENST00000424037 437 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AC005300.1-201ENST00000428401 373 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 CYCSP4-201ENST00000429682 331 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 ATP5JP1-201ENST00000431631 322 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AC004866.2-201ENST00000438285 481 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 SNORD108-201ENST00000459332 71 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AC078785.3-201ENST00000476607 425 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 RN7SL271P-201ENST00000487601 295 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AC098799.2-201ENST00000509466 868 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AP001646.1-201ENST00000527936 915 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 PHBP17-201ENST00000528576 541 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 OR5BN1P-201ENST00000532955 829 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 ARL2BPP2-201ENST00000550907 489 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AL121992.2-201ENST00000606262 256 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AC130324.3-201ENST00000614165 542 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 SNHG22-203ENST00000617833 660 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AC019278.1-201ENST00000623516 479 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AL365440.1-201ENST00000436135 2167 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 AL133383.2-201ENST00000622958 2336 ntBASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
SMC1BQ8NDV3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 Y_RNA.22-201ENST00000362492 102 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 SNORD74.4-201ENST00000364129 80 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AL591416.1-201ENST00000404015 867 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 RNU2-36P-201ENST00000410361 191 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 GABPAP-201ENST00000419271 1356 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 BX842559.1-201ENST00000419615 532 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AC087650.1-201ENST00000431445 468 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AL353743.1-202ENST00000431724 1695 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 USP12PX-201ENST00000432383 1057 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AC005019.1-201ENST00000436455 431 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 MTCO3P45-201ENST00000443036 613 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AC116562.3-201ENST00000506136 177 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AC018710.1-201ENST00000506509 158 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AC105417.1-201ENST00000514691 285 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 RNA5SP164-201ENST00000516533 110 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AC068587.5-201ENST00000528506 175 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AC125611.2-201ENST00000551907 647 ntBASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.59□□□□□ -1.67
SMC1BQ8NDV3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms