Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 MRPL50P2-201ENST00000416821 482 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC009518.2-201ENST00000418056 731 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 OR2B8P-201ENST00000432841 938 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 GDI2P2-201ENST00000445131 608 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC108860.1-201ENST00000484521 383 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC010486.3-201ENST00000511602 785 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 ERHP1-201ENST00000523006 310 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 MTND4LP18-201ENST00000526864 291 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AL391156.1-201ENST00000554965 554 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 OR4H12P-201ENST00000556269 907 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 MIR4319-201ENST00000577285 85 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC138761.3-201ENST00000579993 334 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 MIR4672-201ENST00000583126 81 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 TPMTP1-201ENST00000592307 737 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AP000403.1-201ENST00000603349 851 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC002076.2-201ENST00000617362 122 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC006111.3-201ENST00000622137 383 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC007998.5-201ENST00000622938 237 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC091965.5-201ENST00000624785 342 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC093591.3-201ENST00000634516 308 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC009812.4-201ENST00000569134 1805 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC009902.3-201ENST00000606235 2172 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC012321.1-201ENST00000561622 1588 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 RNU1-35P-201ENST00000362782 153 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 RNU6-637P-201ENST00000384050 107 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AL136372.1-201ENST00000403060 228 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 CCNG1P1-201ENST00000406783 885 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 RNU6-516P-201ENST00000411381 104 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 HSPE1P1-201ENST00000421494 318 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC236972.1-201ENST00000433225 199 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 TPT1P14-201ENST00000448018 505 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC108938.1-201ENST00000451204 136 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AP1S2P1-201ENST00000457344 379 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 UBE2DNL-203ENST00000474922 222 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC022483.1-201ENST00000514020 567 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 SNORD59.2-201ENST00000516873 68 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC025881.1-201ENST00000518851 512 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 SETP2-201ENST00000553886 926 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC091489.2-201ENST00000566263 604 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC005951.1-201ENST00000576706 485 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 BDH2P1-201ENST00000602288 736 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC006023.1-201ENST00000603944 259 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC106900.2-201ENST00000604994 317 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC092354.1-201ENST00000606057 376 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AL031775.1-201ENST00000607014 887 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 CU459211.1-201ENST00000635667 749 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 MIR3974-201ENST00000637126 96 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 AC093831.2-201ENST00000624393 3427 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC60Q8IWA6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 RNU1-112P-201ENST00000364401 164 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 MIR512-1-201ENST00000384913 84 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 MT-TH-201ENST00000387441 69 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 Z99497.1-201ENST00000421282 135 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AP001804.3-201ENST00000525146 880 ntBASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC60Q8IWA6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms