Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC134698.4-201ENST00000523451 826 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 AP000907.4-201ENST00000604143 237 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 AL591034.3-201ENST00000605511 685 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC104458.1-201ENST00000608243 463 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC012531.5-201ENST00000611375 151 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 SDR42E1P2-201ENST00000614861 481 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC010133.1-201ENST00000615809 842 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHFQ7M4L6 FRG1KP-201ENST00000623592 341 ntBASIC3.31□□□□□ -1.88
SHFQ7M4L6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHFQ7M4L6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHFQ7M4L6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SHFQ7M4L6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHFQ7M4L6 GABPAP-201ENST00000419271 1356 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHFQ7M4L6 RNU6-534P-201ENST00000364877 106 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 RNA5SP189-201ENST00000364920 115 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHFQ7M4L6 RNU6-701P-201ENST00000384059 107 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 RNU6-606P-201ENST00000384721 111 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 PTMAP5-201ENST00000393073 333 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 NDUFS5P1-201ENST00000405668 289 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC114491.1-201ENST00000416095 246 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 MRPL50P2-201ENST00000416821 482 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC008850.1-201ENST00000427546 362 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 RN7SL432P-201ENST00000484057 298 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 RPL36AP51-201ENST00000487216 318 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 FCF1P3-201ENST00000496394 590 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC116562.3-201ENST00000506136 177 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC023141.12-201ENST00000512399 199 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 RNU6-1281P-201ENST00000516223 105 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC068587.5-201ENST00000528506 175 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC103843.2-201ENST00000530523 682 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 RPS3AP4-201ENST00000555161 764 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC034105.3-201ENST00000565294 442 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC024619.4-201ENST00000580924 316 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 AL606490.9-201ENST00000603331 271 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC068831.8-201ENST00000620171 435 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SHFQ7M4L6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHFQ7M4L6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SHFQ7M4L6 AL353746.1-201ENST00000566293 6881 ntBASIC3.3□□□□□ -1.88
SHFQ7M4L6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHFQ7M4L6 Y_RNA.89-201ENST00000363031 102 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 RNU4-48P-201ENST00000365559 182 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 RNU6-213P-201ENST00000384051 104 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 MIR454-201ENST00000390180 115 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL591416.1-201ENST00000404015 867 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 RNU6-908P-201ENST00000410160 94 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC018630.2-202ENST00000422992 927 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC016691.1-201ENST00000441321 413 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC020550.1-201ENST00000447385 163 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 NFU1P2-201ENST00000448700 469 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL162151.2-201ENST00000448875 158 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC006539.3-201ENST00000454258 129 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AL356010.1-201ENST00000456364 102 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 MRPS17P3-201ENST00000465453 385 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC092451.1-201ENST00000480211 153 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 PCBP2P3-201ENST00000509726 843 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC117522.1-201ENST00000509821 380 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 GMPSP1-201ENST00000514075 579 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.29□□□□□ -1.88
SHFQ7M4L6 SNORA31.8-201ENST00000516327 108 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 SNORA40.12-201ENST00000516329 111 ntBASIC3.29□□□□□ -1.88
SHFQ7M4L6 RNU6-835P-201ENST00000516974 104 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms