Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AL606834.2-201ENST00000602954 668 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AL022099.1-201ENST00000604551 712 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AL161729.4-201ENST00000604650 476 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AC012443.1-201ENST00000605605 231 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AC073657.2-201ENST00000605661 303 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AL139286.2-201ENST00000606838 396 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AL603758.1-201ENST00000618654 241 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AC136475.10-201ENST00000620253 385 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.84□□□□□ -1.8
SYNE3Q6ZMZ3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.8
SYNE3Q6ZMZ3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 RNU5E-1-201ENST00000362477 120 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 SNORA48.8-201ENST00000391324 134 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 RNA5SP44-201ENST00000410446 133 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 HMGB3P23-201ENST00000414981 585 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AC019097.1-201ENST00000424783 735 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AC093156.1-201ENST00000440382 670 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 USP9YP15-201ENST00000442391 422 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AC016696.1-201ENST00000446949 318 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AL162389.1-201ENST00000449233 177 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AC008155.2-201ENST00000464337 397 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AC110794.1-201ENST00000505816 425 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AP003033.1-201ENST00000527244 415 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 MIR4293-201ENST00000584305 78 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AC098614.4-201ENST00000607601 462 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AC019226.1-201ENST00000625666 515 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 AC092447.7-201ENST00000422212 1621 ntBASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNE3Q6ZMZ3 MAPK10-362ENST00000641864 4484 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 RNU1-70P-201ENST00000362618 164 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 RNU6-511P-201ENST00000363496 107 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 SNORA51.2-201ENST00000364595 132 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 RNU6-76P-201ENST00000384060 104 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 RNU6-432P-201ENST00000384196 109 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 RNU6-1042P-201ENST00000384204 107 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 U3.19-201ENST00000390893 196 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC245291.1-201ENST00000419501 328 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 RPS15AP6-201ENST00000420703 385 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC079448.1-201ENST00000449377 373 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 KLHL2P1-201ENST00000508691 521 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 SNORA64.4-201ENST00000516632 81 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC080078.2-201ENST00000603766 501 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC090970.3-201ENST00000612566 866 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 AC072046.2-201ENST00000618366 268 ntBASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNE3Q6ZMZ3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 Y_RNA.517-201ENST00000384551 106 ntBASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 HMGB1P12-201ENST00000438594 598 ntBASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 RPL26P6-201ENST00000440913 438 ntBASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 AP002884.2-201ENST00000471647 395 ntBASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 RBM43P1-201ENST00000476891 1081 ntBASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 RPS4XP13-201ENST00000483219 789 ntBASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 AC010587.1-201ENST00000505809 469 ntBASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.81□□□□□ -1.8
SYNE3Q6ZMZ3 AC104027.1-201ENST00000521887 300 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms