Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.14□□□□□ -1.91
LYSMD4Q5XG99 MIR622-201ENST00000638396 96 ntBASIC3.14□□□□□ -1.91
LYSMD4Q5XG99 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.14□□□□□ -1.91
LYSMD4Q5XG99 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LYSMD4Q5XG99 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 DDX10P1-201ENST00000448545 1933 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 RNU5A-1-201ENST00000362698 116 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 SNORA75-201ENST00000384158 137 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 RNU6-297P-201ENST00000384636 107 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 Z98941.1-201ENST00000407764 100 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 RNA5SP229-201ENST00000410809 99 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 RPL17P12-201ENST00000413391 526 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AL136097.1-201ENST00000456945 913 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 MTCO2P18-201ENST00000457151 658 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 RN7SL93P-201ENST00000463035 293 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AC055855.1-201ENST00000489563 579 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AC091435.1-201ENST00000505442 584 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AC079140.3-201ENST00000511111 550 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 FABP5P5-201ENST00000515537 406 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 NDUFB9P3-201ENST00000521269 501 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 MIR3921-201ENST00000577308 85 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AC146944.4-201ENST00000602697 718 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AC009570.1-201ENST00000609599 745 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AC110801.1-201ENST00000623590 212 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AL603839.4-201ENST00000624658 1005 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 MIR4275-201ENST00000636486 87 ntBASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.13□□□□□ -1.91
LYSMD4Q5XG99 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 CUL1P1-201ENST00000509510 2425 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 Y_RNA.194-201ENST00000363985 102 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 SNORA23-201ENST00000365128 182 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 SNORD15B-201ENST00000384714 146 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 MIR19A-201ENST00000384878 82 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 RPS7P13-201ENST00000413955 498 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 HMGB3P23-201ENST00000414981 585 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 USP9YP13-201ENST00000417797 480 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 RPL27AP8-201ENST00000424277 446 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 RPL23AP82-202ENST00000427528 469 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 HIGD1AP11-201ENST00000438361 280 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 RPL22P17-201ENST00000438729 315 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 MTCO2P7-201ENST00000446518 666 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 USP9YP12-201ENST00000450481 570 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 CENPBD1P1-201ENST00000464061 469 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 RPL31P60-201ENST00000478450 367 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 HSPE1P6-201ENST00000479457 291 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 RPL23AP41-201ENST00000484754 458 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AL359273.1-201ENST00000510918 627 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC123904.2-201ENST00000548059 300 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC024909.2-201ENST00000553035 286 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AL133153.1-201ENST00000557756 303 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC007038.2-201ENST00000608095 740 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC004908.2-201ENST00000609090 574 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC108747.1-201ENST00000609508 535 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AL355472.4-201ENST00000610233 626 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC093838.1-201ENST00000613014 469 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC011939.3-201ENST00000613686 466 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 RPS4XP5-202ENST00000449995 1334 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 AC090740.1-201ENST00000623193 2262 ntBASIC3.12□□□□□ -1.91
LYSMD4Q5XG99 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 AL138713.1-201ENST00000624026 2130 ntBASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LYSMD4Q5XG99 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms