Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.58□□□□□ -1.52
TMEM259Q4ZIN3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM259Q4ZIN3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TMEM259Q4ZIN3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM259Q4ZIN3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM259Q4ZIN3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.58□□□□□ -1.52
TMEM259Q4ZIN3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM259Q4ZIN3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TMEM259Q4ZIN3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TMEM259Q4ZIN3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 RNA5SP183-201ENST00000362452 119 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 Y_RNA.237-201ENST00000364439 102 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 SNORA70.6-201ENST00000383934 134 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 RNU6-171P-201ENST00000384354 107 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 MIR215-201ENST00000384858 110 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 RPS29P27-201ENST00000463711 170 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 AC010469.2-201ENST00000496412 480 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 AL671862.1-201ENST00000515851 349 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 SNORA31.8-201ENST00000516327 108 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 Y_RNA.713-201ENST00000517013 96 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 AC010186.2-204ENST00000537668 439 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 MIR3936-201ENST00000584304 110 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 AP001282.2-201ENST00000616149 309 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 AL138820.1-201ENST00000617901 5305 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 Z95331.1-201ENST00000623075 23112 ntBASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TMEM259Q4ZIN3 PCAT14-202ENST00000627127 3935 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 RPL21P75-201ENST00000396599 483 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 RPL21P28-201ENST00000401418 483 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 MIR1286-201ENST00000408112 78 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 CTSL3P-202ENST00000412179 788 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AL590556.1-201ENST00000423231 483 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 PIGPP3-201ENST00000425307 415 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 C4BPAP2-201ENST00000428434 478 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 RPS6P12-201ENST00000432491 726 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 RPL23AP22-201ENST00000437556 453 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AL139109.1-201ENST00000455491 297 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 RPL21P11-201ENST00000461458 483 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 RPL21P39-201ENST00000463605 483 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 RN7SL51P-201ENST00000468230 285 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AC132942.1-201ENST00000486753 483 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AC093591.1-201ENST00000491435 481 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 RPL21P16-201ENST00000495531 483 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AC104581.2-201ENST00000572227 430 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 MIR1269B-201ENST00000580405 75 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AC010900.2-201ENST00000604508 210 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AC126915.2-201ENST00000610957 190 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 SDR42E1P1-201ENST00000611327 477 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 MIR376A1-201ENST00000616574 68 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 MIR6837-201ENST00000620884 64 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 U6.99-201ENST00000637524 83 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AC099654.2-201ENST00000433031 1980 ntBASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.56□□□□□ -1.52
TMEM259Q4ZIN3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 RNU1-35P-201ENST00000362782 153 ntBASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 SNORA11B-201ENST00000408175 129 ntBASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 CASP1P1-201ENST00000526345 212 ntBASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 AC010632.3-201ENST00000611377 369 ntBASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 MIR6719-201ENST00000622428 87 ntBASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 AC099506.2-201ENST00000623074 221 ntBASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.55□□□□□ -1.52
TMEM259Q4ZIN3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms