Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AC008568.2-201ENST00000623862 2313 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 MFSD8-236ENST00000641509 4050 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 RNY4P16-201ENST00000364768 94 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 SNORA23-201ENST00000365128 182 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 Y_RNA.409-201ENST00000383990 98 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AC000111.3-201ENST00000433478 193 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 TXNP1-201ENST00000441872 371 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 USP9YP15-201ENST00000442391 422 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 MTND1P12-201ENST00000455231 147 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AC023598.1-201ENST00000472521 361 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 SNORA31.1-201ENST00000515993 133 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 SNORA31.5-201ENST00000516190 133 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 SNORA31.22-201ENST00000517204 135 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 OR5AQ1P-201ENST00000527596 927 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 OR4T1P-201ENST00000554933 911 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AC004908.2-201ENST00000609090 574 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 OR4G2P-202ENST00000641004 1759 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 RNA5SP97-201ENST00000365006 84 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 SOD2P1-201ENST00000396543 562 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 MIR1277-201ENST00000408536 78 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 SNORA57.3-201ENST00000411095 141 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 AC018630.2-202ENST00000422992 927 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 AL136380.1-201ENST00000447970 162 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 RPS15AP36-201ENST00000492022 382 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 RNU6-390P-201ENST00000516259 103 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 RN7SKP83-201ENST00000516512 178 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 AK6P1-201ENST00000540219 478 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 HMGB1P33-201ENST00000563485 527 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 AC087499.8-201ENST00000578406 226 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 MIR3167-201ENST00000579623 85 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 MIR3146-201ENST00000580367 79 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 AF038458.1-201ENST00000588406 262 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 AL391646.1-201ENST00000603860 190 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 AC007038.2-201ENST00000608095 740 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 U6.42-201ENST00000618440 107 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 AC244100.1-202ENST00000621554 382 ntBASIC4.26□□□□□ -1.73
LONRF3Q496Y0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.26□□□□□ -1.73
LONRF3Q496Y0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 Y_RNA.88-201ENST00000363029 99 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 Y_RNA.453-201ENST00000384223 109 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 RNY3P14-201ENST00000384309 102 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AC093578.1-201ENST00000415219 368 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AC007283.2-201ENST00000424739 197 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 MTCO2P19-201ENST00000427513 598 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AL590383.1-201ENST00000428602 75 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AL356867.1-201ENST00000429623 299 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AC119618.1-201ENST00000434191 222 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AC092573.2-201ENST00000434546 243 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 FTH1P1-201ENST00000437933 532 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.25□□□□□ -1.73
LONRF3Q496Y0 WASF1P1-201ENST00000447560 1131 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AL590664.1-201ENST00000448065 339 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 NANOGP10-201ENST00000453325 895 ntBASIC4.25□□□□□ -1.73
LONRF3Q496Y0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms