Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC144BQ3MJ40 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 MIR493-201ENST00000385254 89 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-1197P-201ENST00000391183 107 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 OR6C66P-201ENST00000414917 930 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 BX842559.1-201ENST00000419615 532 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AC007389.2-201ENST00000434630 306 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 RPL23AP46-201ENST00000438548 490 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 NFU1P2-201ENST00000448700 469 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 RPS29P19-201ENST00000479709 171 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 RNA5SP401-201ENST00000515920 127 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-143P-201ENST00000516942 93 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-685P-201ENST00000517088 95 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 RANP9-201ENST00000519957 271 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AC103843.2-201ENST00000530523 682 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AC022655.2-201ENST00000577280 318 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AC008521.1-201ENST00000587471 187 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AL606490.9-201ENST00000603331 271 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 AL110115.1-201ENST00000614396 364 ntBASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC144BQ3MJ40 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 Y_RNA.38-201ENST00000362617 102 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-288P-201ENST00000363690 104 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-1283P-201ENST00000365314 105 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 MIR23A-201ENST00000385245 73 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AL354719.1-201ENST00000406535 843 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 RNU6-373P-201ENST00000411247 98 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 Z85995.1-201ENST00000415547 335 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 MTCO2P3-201ENST00000442543 421 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 SNRPFP3-201ENST00000457792 225 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 RPL30P5-201ENST00000494923 336 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AC098591.2-201ENST00000510152 315 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AL360157.1-201ENST00000565962 87 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 BNIP3P30-201ENST00000601184 574 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AL138889.2-201ENST00000603883 242 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AC013553.2-201ENST00000604244 589 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AL158032.1-201ENST00000605401 106 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AC024940.5-201ENST00000622889 474 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 TPTE2P4-201ENST00000258589 1605 ntBASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC144BQ3MJ40 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
CCDC144BQ3MJ40 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
CCDC144BQ3MJ40 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 RNU6-1167P-201ENST00000363227 94 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 SNORD37.1-201ENST00000390968 65 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 RNU6-903P-201ENST00000391270 109 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 AL136116.1-201ENST00000403591 381 ntBASIC4.71□□□□□ -1.66
CCDC144BQ3MJ40 RNU2-33P-201ENST00000410344 192 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms