Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 XPOTP1-201ENST00000443317 2398 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 RNU6-511P-201ENST00000363496 107 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 Y_RNA.212-201ENST00000364177 102 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 U3.11-201ENST00000364476 212 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 Y_RNA.463-201ENST00000384271 102 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 RNY1P14-201ENST00000384426 108 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 Y_RNA.496-201ENST00000384444 101 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 Y_RNA.574-201ENST00000384766 95 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 Y_RNA.645-201ENST00000391229 102 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 RPS4XP9-201ENST00000405151 780 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 MIR548I3-201ENST00000408378 149 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 MIR548I1-201ENST00000408810 149 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 MIR1183-201ENST00000408856 89 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 RAC1P6-201ENST00000423911 575 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 OR2AS1P-201ENST00000427827 319 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AL772161.1-201ENST00000439130 476 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AC108734.1-201ENST00000439549 399 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 HMGB3P21-201ENST00000452483 547 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AP001992.1-205ENST00000462248 379 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 RN7SL826P-201ENST00000479724 288 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 HMGB1P41-201ENST00000520234 440 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 MTND4P7-201ENST00000523876 130 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AP002404.1-201ENST00000532005 451 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AP000763.2-201ENST00000540641 163 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AC051619.2-201ENST00000559063 397 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AC053481.3-201ENST00000577881 843 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AC023043.2-201ENST00000589678 1026 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AC018889.1-201ENST00000605372 397 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 CR392039.4-201ENST00000624968 501 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AL669831.3-213ENST00000636676 183 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 AL732372.2-225ENST00000642124 456 ntBASIC4.1□□□□□ -1.75
LSM12Q3MHD2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
LSM12Q3MHD2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC130650.2-201ENST00000618736 2403 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 RNA5SP258-201ENST00000362750 119 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 RNA5SP322-201ENST00000363617 119 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 RNU5A-8P-201ENST00000364102 114 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 Y_RNA.364-201ENST00000365532 101 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 DEFB109C-201ENST00000382575 264 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 DEFB109B-201ENST00000382656 264 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 RNU6-601P-201ENST00000384540 107 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC011998.1-201ENST00000433403 117 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 RPL21P133-201ENST00000443666 476 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC104073.1-201ENST00000451988 151 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 SNRPFP3-201ENST00000457792 225 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 RPL35AP28-201ENST00000459730 331 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 RN7SL354P-201ENST00000469282 294 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 RPL21P93-201ENST00000480465 489 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC021382.1-201ENST00000483523 359 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC026801.2-201ENST00000515352 425 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 RNA5SP503-201ENST00000517047 117 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 MTCO3P23-201ENST00000561363 289 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC138761.3-201ENST00000579993 334 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 uc_338.13-201ENST00000618243 179 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AL596245.1-201ENST00000618994 362 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 AP001784.1-201ENST00000624107 428 ntBASIC4.09□□□□□ -1.75
LSM12Q3MHD2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.09□□□□□ -1.75
LSM12Q3MHD2 CDC27P3-201ENST00000635418 1910 ntBASIC4.09□□□□□ -1.76
LSM12Q3MHD2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LSM12Q3MHD2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LSM12Q3MHD2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LSM12Q3MHD2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.08□□□□□ -1.76
LSM12Q3MHD2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.08□□□□□ -1.76
LSM12Q3MHD2 MIR331-201ENST00000362302 94 ntBASIC4.08□□□□□ -1.76
LSM12Q3MHD2 RNU6-97P-201ENST00000363387 104 ntBASIC4.08□□□□□ -1.76
LSM12Q3MHD2 Y_RNA.252-201ENST00000364556 101 ntBASIC4.08□□□□□ -1.76
LSM12Q3MHD2 SNORD116-11-201ENST00000383882 92 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms