Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 ATP5C1P1-201ENST00000441945 895 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 GAPDHP17-201ENST00000449858 1001 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC108059.3-201ENST00000456388 214 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 TPT1P7-201ENST00000458300 517 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 RPS4XP13-201ENST00000483219 789 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP41Q3LFD5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC114797.1-201ENST00000514003 728 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 MIR3682-201ENST00000581338 84 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC090578.1-201ENST00000604955 591 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC245517.5-201ENST00000611529 162 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 AL157817.1-201ENST00000614264 790 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP41Q3LFD5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC005832.2-201ENST00000538921 1430 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP41Q3LFD5 AC017071.1-201ENST00000564407 2204 ntBASIC3.51□□□□□ -1.85
USP41Q3LFD5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
USP41Q3LFD5 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USP41Q3LFD5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP41Q3LFD5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.5□□□□□ -1.85
USP41Q3LFD5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.5□□□□□ -1.85
USP41Q3LFD5 U8.3-201ENST00000363321 132 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 UBA52P6-201ENST00000399822 382 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC126124.2-201ENST00000413542 321 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 C1DP2-201ENST00000418167 426 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.5□□□□□ -1.85
USP41Q3LFD5 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC119618.1-201ENST00000434191 222 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.5□□□□□ -1.85
USP41Q3LFD5 USP9YP15-201ENST00000442391 422 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 S100A11P2-201ENST00000467589 312 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC108860.1-201ENST00000484521 383 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.5□□□□□ -1.85
USP41Q3LFD5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC010587.1-201ENST00000505809 469 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC109464.2-201ENST00000510242 943 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 RN7SKP298-201ENST00000515950 94 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AP003392.2-201ENST00000527269 208 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 DEFB108A-201ENST00000530110 222 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 MIR3913-1-201ENST00000577744 102 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC079089.3-201ENST00000603094 673 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC091304.9-201ENST00000612091 226 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC084782.3-201ENST00000612282 578 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AL589743.7-201ENST00000612637 233 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC093838.1-201ENST00000613014 469 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AC006338.1-201ENST00000618453 749 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AL603758.1-201ENST00000618654 241 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 AL136313.1-201ENST00000624804 202 ntBASIC3.5□□□□□ -1.85
USP41Q3LFD5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP41Q3LFD5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP41Q3LFD5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP41Q3LFD5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP41Q3LFD5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.5□□□□□ -1.85
USP41Q3LFD5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.5□□□□□ -1.85
USP41Q3LFD5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USP41Q3LFD5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP41Q3LFD5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP41Q3LFD5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 FARSBP1-201ENST00000435808 1778 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP41Q3LFD5 SNORA23-201ENST00000365128 182 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 RNY3P13-201ENST00000365542 102 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP41Q3LFD5 RNU6-76P-201ENST00000384060 104 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 AL109755.1-201ENST00000401791 649 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 AL136372.1-201ENST00000403060 228 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 ELOCP17-201ENST00000414751 326 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 PPP1R11P2-201ENST00000423543 382 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 MTATP6P4-201ENST00000427725 675 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 RPL26P6-201ENST00000440913 438 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 ELOCP30-201ENST00000447108 299 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 AL162389.1-201ENST00000449233 177 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 AC006445.1-201ENST00000491925 405 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.49□□□□□ -1.85
USP41Q3LFD5 RNA5SP341-201ENST00000516261 117 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 RNU6-405P-201ENST00000516637 110 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 AC107934.2-201ENST00000518653 310 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 AC093331.1-201ENST00000521474 169 ntBASIC3.49□□□□□ -1.85
USP41Q3LFD5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms