Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RNU6-514P-201ENST00000384208 107 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 RNU4-30P-201ENST00000410245 143 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 RNA5SP89-201ENST00000410300 108 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 AL133482.1-201ENST00000415988 498 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 PPIAP3-201ENST00000450588 505 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 EEF1B2P7-201ENST00000451177 676 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 RPL10P17-201ENST00000453852 316 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 U8.22-201ENST00000459141 133 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 RPL31P60-201ENST00000478450 367 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 AC008897.1-201ENST00000494006 347 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 AC092470.1-201ENST00000546187 132 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 EDDM3DP-201ENST00000554692 434 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 MIR6129-201ENST00000616087 109 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 AC073349.3-201ENST00000617616 186 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTC1Q2NKJ3 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AC027228.2-201ENST00000567141 2154 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 RNU1-74P-201ENST00000384108 171 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 MIR521-1-201ENST00000384902 87 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 MIR190B-201ENST00000401119 79 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 HSPA8P15-201ENST00000401676 786 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 RNU6-603P-201ENST00000411403 107 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 COX6B1P1-201ENST00000415962 213 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AC069213.2-201ENST00000420238 366 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AC024067.1-201ENST00000426199 223 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 SEPT7P4-201ENST00000437076 306 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AC009963.2-201ENST00000453431 138 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 RN7SL385P-201ENST00000468873 276 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AC097484.1-201ENST00000471148 389 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 RNU6-1012P-201ENST00000516606 109 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AC025755.1-201ENST00000521306 278 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AC209154.1-201ENST00000582156 337 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AC006077.1-201ENST00000604746 343 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AC068870.1-201ENST00000563737 2455 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 AL137141.1-201ENST00000624622 4836 ntBASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTC1Q2NKJ3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 AC135776.4-201ENST00000624300 1904 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 BCORP1-203ENST00000513194 5093 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 RNU4-84P-201ENST00000364200 139 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 SNORA62-201ENST00000365493 153 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 AL022722.2-201ENST00000402519 180 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 OOSP1P1-201ENST00000423265 274 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 RPL12P17-201ENST00000432393 498 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 AC008264.1-201ENST00000447612 367 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 snoU13.20-201ENST00000459180 104 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 SNORD125-201ENST00000459538 96 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 SNORA25.12-201ENST00000516202 82 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 CASP1P1-201ENST00000526345 212 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 DEFB108D-201ENST00000527787 222 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 AP004242.1-201ENST00000533701 349 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 AC127455.1-201ENST00000565496 145 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 MIR5582-201ENST00000579697 68 ntBASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.66□□□□□ -1.5
CTC1Q2NKJ3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms