Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC079395.3-201ENST00000615161 484 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 AC025016.1-201ENST00000616746 682 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 AL589994.2-201ENST00000621124 579 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RFX7Q2KHR2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
RFX7Q2KHR2 MTND4P23-201ENST00000447723 1363 ntBASIC1.92□□□□□ -2.1
RFX7Q2KHR2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 HMGB3P31-201ENST00000413333 595 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.91□□□□□ -2.1
RFX7Q2KHR2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.91□□□□□ -2.1
RFX7Q2KHR2 AC087441.2-201ENST00000529141 262 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 GLYCAM1-201ENST00000546596 285 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.91□□□□□ -2.1
RFX7Q2KHR2 AGGF1P5-201ENST00000567900 919 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 AL669831.4-202ENST00000590817 238 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 AC078899.2-201ENST00000595282 212 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 AP001330.4-201ENST00000604350 154 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 AC138473.1-201ENST00000605717 526 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RFX7Q2KHR2 SDR42E1P2-201ENST00000614861 481 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 AP001486.3-201ENST00000615334 372 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 SDR42E1P4-201ENST00000620894 481 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.91□□□□□ -2.1
RFX7Q2KHR2 RNA5SP258-201ENST00000362750 119 ntBASIC1.9□□□□□ -2.11
RFX7Q2KHR2 RNU4-78P-201ENST00000410940 126 ntBASIC1.9□□□□□ -2.11
RFX7Q2KHR2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.9□□□□□ -2.11
RFX7Q2KHR2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.9□□□□□ -2.11
RFX7Q2KHR2 MRPS17P9-201ENST00000511924 393 ntBASIC1.9□□□□□ -2.11
RFX7Q2KHR2 RNU2-44P-201ENST00000516795 194 ntBASIC1.9□□□□□ -2.11
RFX7Q2KHR2 IGKV2D-36-201ENST00000518643 226 ntBASIC1.9□□□□□ -2.11
RFX7Q2KHR2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.9□□□□□ -2.11
RFX7Q2KHR2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.9□□□□□ -2.11
RFX7Q2KHR2 XIAPP1-201ENST00000603162 600 ntBASIC1.9□□□□□ -2.11
RFX7Q2KHR2 AC012360.2-201ENST00000609349 391 ntBASIC1.9□□□□□ -2.11
RFX7Q2KHR2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.9□□□□□ -2.11
RFX7Q2KHR2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.9□□□□□ -2.11
RFX7Q2KHR2 AC027514.1-201ENST00000588561 1603 ntBASIC1.9□□□□□ -2.11
RFX7Q2KHR2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RFX7Q2KHR2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RFX7Q2KHR2 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RFX7Q2KHR2 Y_RNA.466-201ENST00000384294 113 ntBASIC1.89□□□□□ -2.11
RFX7Q2KHR2 ARPC3P1-201ENST00000437218 533 ntBASIC1.89□□□□□ -2.11
RFX7Q2KHR2 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.89□□□□□ -2.11
RFX7Q2KHR2 RPL23AP41-201ENST00000484754 458 ntBASIC1.89□□□□□ -2.11
RFX7Q2KHR2 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.89□□□□□ -2.11
RFX7Q2KHR2 EIF4EP3-201ENST00000498782 656 ntBASIC1.89□□□□□ -2.11
RFX7Q2KHR2 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RFX7Q2KHR2 AC083923.1-201ENST00000523708 376 ntBASIC1.89□□□□□ -2.11
RFX7Q2KHR2 AC139103.1-201ENST00000534696 1030 ntBASIC1.89□□□□□ -2.11
RFX7Q2KHR2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.89□□□□□ -2.11
RFX7Q2KHR2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.89□□□□□ -2.11
RFX7Q2KHR2 AC090666.1-201ENST00000578241 445 ntBASIC1.89□□□□□ -2.11
RFX7Q2KHR2 AC106900.2-201ENST00000604994 317 ntBASIC1.89□□□□□ -2.11
RFX7Q2KHR2 AL512598.1-201ENST00000610158 273 ntBASIC1.89□□□□□ -2.11
RFX7Q2KHR2 AL161423.1-201ENST00000613700 262 ntBASIC1.89□□□□□ -2.11
RFX7Q2KHR2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.89□□□□□ -2.11
RFX7Q2KHR2 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.89□□□□□ -2.11
RFX7Q2KHR2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.89□□□□□ -2.11
RFX7Q2KHR2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 RNU6-707P-201ENST00000364647 95 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 PRRC2CP1-201ENST00000404428 159 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 MIR1303-201ENST00000408625 86 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 POLHP1-201ENST00000411806 470 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 AC009296.1-201ENST00000443146 155 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 AL136380.1-201ENST00000447970 162 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 RPS15AP27-201ENST00000449183 343 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 BX248409.1-201ENST00000455497 255 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 ANKRD26P4-201ENST00000455755 950 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 SNRPFP4-201ENST00000456366 242 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 MIR4504-201ENST00000577413 92 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 AC005498.1-201ENST00000592125 465 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 uc_338.5-201ENST00000611839 155 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 AC116618.1-201ENST00000634617 774 ntBASIC1.88□□□□□ -2.11
RFX7Q2KHR2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RFX7Q2KHR2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
RFX7Q2KHR2 RNU6-891P-201ENST00000384280 111 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RFX7Q2KHR2 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 RPS3AP9-201ENST00000417027 792 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 AC234781.2-201ENST00000426370 994 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.87□□□□□ -2.11
RFX7Q2KHR2 OR6K5P-201ENST00000447050 945 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 BX322784.1-201ENST00000455793 1077 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 AL359385.1-201ENST00000456509 365 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 ATG12P2-201ENST00000456830 416 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 AC087588.1-201ENST00000462203 316 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 AC109464.2-201ENST00000510242 943 ntBASIC1.87□□□□□ -2.11
RFX7Q2KHR2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms