Protein–RNA interactions for Protein: Q13509

TUBB3, Tubulin beta-3 chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3Q13509 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TUBB3Q13509 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TUBB3Q13509 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TUBB3Q13509 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.94□□□□□ -1.78
TUBB3Q13509 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TUBB3Q13509 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TUBB3Q13509 AC006026.1-201ENST00000444025 1803 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TUBB3Q13509 AL139276.1-201ENST00000311910 1001 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TUBB3Q13509 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TUBB3Q13509 Y_RNA.231-201ENST00000364358 102 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 MIR514A2-201ENST00000385131 88 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 MIR514A3-201ENST00000385132 88 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 RPL23AP48-201ENST00000406913 488 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 Y_RNA.615-201ENST00000410769 117 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 HSPE1P12-201ENST00000412576 301 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 EEF1A1P40-201ENST00000412883 573 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 EI24P1-201ENST00000416584 867 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 SSXP9-201ENST00000417503 292 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 AL353678.1-201ENST00000422735 741 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 RPL35AP12-201ENST00000425362 338 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 MTCO3P46-201ENST00000425787 232 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.94□□□□□ -1.78
TUBB3Q13509 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.94□□□□□ -1.78
TUBB3Q13509 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.94□□□□□ -1.78
TUBB3Q13509 AC006011.1-201ENST00000442758 349 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 MTND1P18-201ENST00000448191 573 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 AL162389.1-201ENST00000449233 177 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 SNORD97-201ENST00000459187 142 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 AC110792.1-201ENST00000491826 472 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.94□□□□□ -1.78
TUBB3Q13509 FGF7P4-201ENST00000509595 295 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 Y_RNA.675-201ENST00000516389 149 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 RNU2-58P-201ENST00000516403 183 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 RNU6-1092P-201ENST00000516955 87 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 RNA5SP503-201ENST00000517047 117 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 BTF3P12-201ENST00000519620 469 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 AP004242.1-201ENST00000533701 349 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.94□□□□□ -1.78
TUBB3Q13509 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.94□□□□□ -1.78
TUBB3Q13509 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.94□□□□□ -1.78
TUBB3Q13509 AC053481.4-201ENST00000583164 216 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 VN1R80P-201ENST00000597126 338 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.94□□□□□ -1.78
TUBB3Q13509 MIR7151-201ENST00000617477 60 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.94□□□□□ -1.78
TUBB3Q13509 AC243312.2-201ENST00000623340 601 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.94□□□□□ -1.78
TUBB3Q13509 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.94□□□□□ -1.78
TUBB3Q13509 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
TUBB3Q13509 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TUBB3Q13509 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TUBB3Q13509 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TUBB3Q13509 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TUBB3Q13509 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.94□□□□□ -1.78
TUBB3Q13509 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TUBB3Q13509 AL157700.1-201ENST00000561973 1432 ntBASIC3.94□□□□□ -1.78
TUBB3Q13509 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.94□□□□□ -1.78
TUBB3Q13509 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TUBB3Q13509 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
TUBB3Q13509 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
TUBB3Q13509 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
TUBB3Q13509 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
TUBB3Q13509 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.93□□□□□ -1.78
TUBB3Q13509 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TUBB3Q13509 TAB3P1-202ENST00000452645 1634 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.93□□□□□ -1.78
TUBB3Q13509 SNORA60-201ENST00000362396 134 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 RNU6-179P-201ENST00000363350 107 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 RNU6-1284P-201ENST00000363701 100 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TUBB3Q13509 SNORA32.2-201ENST00000384049 122 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 SNORA24.1-201ENST00000384401 135 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 UBE2V1P2-201ENST00000397758 440 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 AL583834.1-201ENST00000406943 343 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 RNU4-6P-201ENST00000410804 122 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.93□□□□□ -1.78
TUBB3Q13509 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.93□□□□□ -1.78
TUBB3Q13509 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.93□□□□□ -1.78
TUBB3Q13509 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TUBB3Q13509 GAPDHP27-201ENST00000447427 1020 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 AL500522.2-201ENST00000448562 343 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.93□□□□□ -1.78
TUBB3Q13509 AC008481.1-201ENST00000463278 396 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 RPL29P14-201ENST00000495837 428 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 AC078918.1-201ENST00000498515 228 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 AC005921.1-201ENST00000510589 286 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.93□□□□□ -1.78
TUBB3Q13509 AC026801.2-201ENST00000515352 425 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.93□□□□□ -1.78
TUBB3Q13509 RNU6-1314P-201ENST00000517139 104 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.93□□□□□ -1.78
TUBB3Q13509 AC100870.1-201ENST00000522035 505 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.93□□□□□ -1.78
TUBB3Q13509 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.93□□□□□ -1.78
TUBB3Q13509 AC125611.2-201ENST00000551907 647 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 AC078814.3-201ENST00000553036 491 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 AC037471.2-201ENST00000564941 598 ntBASIC3.93□□□□□ -1.78
TUBB3Q13509 MIR4703-201ENST00000577728 79 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms