Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL161449.1-201ENST00000414531 1199 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.43□□□□□ -2.18
HIST1H1AQ02539 FAM103A2P-201ENST00000444122 354 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.43□□□□□ -2.18
HIST1H1AQ02539 PPP1R2P5-201ENST00000457256 603 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AC087884.1-201ENST00000469738 328 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 RPS27P23-201ENST00000487608 251 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 MTAPP1-201ENST00000489154 819 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 RPL38P4-201ENST00000502376 214 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AC006390.1-201ENST00000508068 283 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.43□□□□□ -2.18
HIST1H1AQ02539 HMGB1P1-201ENST00000522557 636 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AL391261.3-201ENST00000557194 520 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.43□□□□□ -2.18
HIST1H1AQ02539 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AC068313.1-201ENST00000604028 1008 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AC090132.2-201ENST00000615881 347 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AC068057.2-201ENST00000624047 895 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.43□□□□□ -2.18
HIST1H1AQ02539 AC110994.2-201ENST00000635481 492 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 WWP1P1-201ENST00000466609 2769 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 ZNF702P-202ENST00000434269 1966 ntBASIC1.43□□□□□ -2.18
HIST1H1AQ02539 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.42□□□□□ -2.18
HIST1H1AQ02539 RNU4-42P-201ENST00000364738 142 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.42□□□□□ -2.18
HIST1H1AQ02539 RNU6-891P-201ENST00000384280 111 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 SNORD51-201ENST00000384320 80 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 RSL24D1P4-201ENST00000400938 484 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AL355615.1-201ENST00000406187 641 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.42□□□□□ -2.18
HIST1H1AQ02539 NDUFB4P7-201ENST00000423198 363 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 RPP40P1-201ENST00000426762 456 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AL445646.1-201ENST00000431784 216 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.42□□□□□ -2.18
HIST1H1AQ02539 BZW1P2-201ENST00000473537 826 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 RPL7P18-201ENST00000478965 734 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AC008549.1-201ENST00000512900 643 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.42□□□□□ -2.18
HIST1H1AQ02539 SCARNA3-201ENST00000517097 143 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AC022880.1-201ENST00000534017 973 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AC007375.1-201ENST00000554513 578 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AC015688.2-201ENST00000584523 262 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AL021997.1-201ENST00000605757 193 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AC024595.1-201ENST00000623088 387 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 AC090772.4-201ENST00000623599 362 ntBASIC1.42□□□□□ -2.18
HIST1H1AQ02539 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.42□□□□□ -2.18
HIST1H1AQ02539 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.42□□□□□ -2.18
HIST1H1AQ02539 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HIST1H1AQ02539 ZNF355P-201ENST00000427301 3216 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 SNORA16.1-201ENST00000364597 132 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC019129.1-201ENST00000403786 261 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC023141.4-201ENST00000412031 328 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AL035407.1-201ENST00000429211 571 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 DNAJC19P4-201ENST00000440115 345 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 RPL7P12-201ENST00000446719 750 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 DNAJC19P8-201ENST00000452887 259 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 RPL30P9-201ENST00000465586 330 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC106872.3-201ENST00000495104 446 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC104685.1-201ENST00000502445 371 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC109464.2-201ENST00000510242 943 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC119751.5-201ENST00000514077 770 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 CBX3P2-202ENST00000583365 535 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC243960.4-201ENST00000600532 288 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC021851.1-201ENST00000608537 1082 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC008498.1-201ENST00000613012 531 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC010678.1-201ENST00000614118 713 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AL356585.4-201ENST00000623078 1229 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AL158801.5-201ENST00000623123 465 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC091925.2-201ENST00000625059 256 ntBASIC1.41□□□□□ -2.18
HIST1H1AQ02539 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HIST1H1AQ02539 RNU6-543P-201ENST00000362576 108 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 U8.2-201ENST00000363156 134 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HIST1H1AQ02539 Y_RNA.500-201ENST00000384466 111 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 RNU6-997P-201ENST00000384725 107 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 MIR325-201ENST00000385260 98 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 ATP5F1P6-201ENST00000402768 767 ntBASIC1.4□□□□□ -2.19
HIST1H1AQ02539 VN1R51P-201ENST00000411675 945 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms