Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC103783.1-201ENST00000520506 373 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 MTCO1P47-201ENST00000523889 1271 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.4□□□□□ -2.03
HMGCS1Q01581 AL353997.4-201ENST00000586196 166 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.4□□□□□ -2.03
HMGCS1Q01581 AC112220.3-201ENST00000605502 502 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 AC107952.2-201ENST00000606048 486 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 AL158211.4-201ENST00000606988 584 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.4□□□□□ -2.03
HMGCS1Q01581 AC024560.3-201ENST00000608482 349 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 AL161629.2-201ENST00000615347 275 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 AL136981.2-201ENST00000617319 734 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 AC007998.5-201ENST00000622938 237 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 AC068880.5-201ENST00000624331 290 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 AC092608.2-201ENST00000624427 218 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.4□□□□□ -2.03
HMGCS1Q01581 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HMGCS1Q01581 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HMGCS1Q01581 AC008568.2-201ENST00000623862 2313 ntBASIC2.4□□□□□ -2.03
HMGCS1Q01581 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HMGCS1Q01581 DDX43P2-201ENST00000604753 1354 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 SNORA4.1-201ENST00000364263 144 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 SNORA72.3-201ENST00000365074 132 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 MIR196B-201ENST00000384852 84 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 RNU6-1197P-201ENST00000391183 107 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HMGCS1Q01581 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AL008987.1-201ENST00000415528 237 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC234781.2-201ENST00000426370 994 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC090774.1-201ENST00000435925 246 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 RPS12P2-201ENST00000439728 269 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 RPL31P60-201ENST00000478450 367 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 RN7SL432P-201ENST00000484057 298 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AP003497.1-201ENST00000528472 562 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 DUXAP1-201ENST00000556632 463 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC061975.8-201ENST00000587058 721 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 AL596327.1-201ENST00000603629 213 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC011451.2-201ENST00000604303 598 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 AL592221.1-201ENST00000605266 382 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC011330.2-201ENST00000621680 635 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC008443.7-201ENST00000622195 246 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC006927.4-201ENST00000639187 543 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC010680.1-201ENST00000590024 3590 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HMGCS1Q01581 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AC012321.1-201ENST00000561622 1588 ntBASIC2.39□□□□□ -2.03
HMGCS1Q01581 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
HMGCS1Q01581 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
HMGCS1Q01581 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGCS1Q01581 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HMGCS1Q01581 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 AL161781.1-201ENST00000354277 403 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 Y_RNA.111-201ENST00000363248 100 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 U8.8-201ENST00000365399 135 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 RNU6-744P-201ENST00000365557 107 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 RNU6-1316P-201ENST00000384242 108 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 AL356421.1-201ENST00000403255 413 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC098826.1-201ENST00000433943 471 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 USP9YP10-201ENST00000454868 628 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC092798.1-201ENST00000458542 409 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 HSPE1P23-201ENST00000509838 286 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 MTCYBP43-201ENST00000513621 740 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC022483.1-201ENST00000514020 567 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 RPPH1-2P-201ENST00000516688 293 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 RN7SKP40-201ENST00000517211 242 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.38□□□□□ -2.03
HMGCS1Q01581 MIR4446-201ENST00000578505 67 ntBASIC2.38□□□□□ -2.03
HMGCS1Q01581 AC105224.1-201ENST00000587055 421 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms