Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 RPL38P4-201ENST00000502376 214 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 VN1R104P-201ENST00000505115 1009 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 MLLT10P2-201ENST00000506434 249 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 RNU6-875P-201ENST00000516488 106 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 HMGB1P19-201ENST00000517578 577 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 OR5B19P-201ENST00000531766 928 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AC090877.1-201ENST00000561418 344 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AC091135.1-201ENST00000585943 307 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 LINC00901.1-201ENST00000617252 152 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AC112200.1-201ENST00000625015 234 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AC099654.5-201ENST00000636479 350 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 AC100810.6-201ENST00000638068 285 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 ASNSP3-201ENST00000451989 1306 ntBASIC4.14□□□□□ -1.75
CDC42EP1Q00587 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDC42EP1Q00587 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 XIAPP3-201ENST00000312918 795 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 RNU6-552P-201ENST00000362869 119 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 SNORA73.2-201ENST00000364946 201 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 SYF2P2-201ENST00000417620 583 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 RPS3AP46-201ENST00000448352 682 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 RPL5P30-201ENST00000465511 891 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC010285.1-201ENST00000470580 392 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC106707.2-201ENST00000484182 374 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC092436.1-201ENST00000506450 503 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 KLHL2P1-201ENST00000508691 521 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC004062.1-201ENST00000509926 645 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC108078.2-201ENST00000510750 236 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 RNU4-29P-201ENST00000515943 174 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 RNA5SP143-201ENST00000516936 115 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 ERHP1-201ENST00000523006 310 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC022882.1-201ENST00000532142 501 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 MIR4703-201ENST00000577728 79 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC024619.4-201ENST00000580924 316 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC011712.1-201ENST00000588959 234 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC006116.10-201ENST00000591836 581 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 SDR42E1P2-201ENST00000614861 481 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AL359314.1-201ENST00000616913 261 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC079684.1-201ENST00000621405 437 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC067931.1-201ENST00000624190 671 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AC073544.1-201ENST00000600110 1595 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.13□□□□□ -1.75
CDC42EP1Q00587 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CDC42EP1Q00587 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 AC092326.2-201ENST00000624772 1561 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 Y_RNA.72-201ENST00000362894 103 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 RNU6-173P-201ENST00000364215 104 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 RNU6-61P-201ENST00000365528 109 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 SMIM11P1-201ENST00000369586 178 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 RNU2-29P-201ENST00000410423 189 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 AC068533.1-201ENST00000418542 415 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 AL451062.2-201ENST00000427515 271 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 MTATP6P4-201ENST00000427725 675 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 MTND3P23-201ENST00000431980 347 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 SNORA71B-202ENST00000439232 272 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 CBWD4P-201ENST00000445695 655 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 AC010486.1-201ENST00000511793 424 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.12□□□□□ -1.75
CDC42EP1Q00587 GMPSP1-201ENST00000514075 579 ntBASIC4.12□□□□□ -1.75
CDC42EP1Q00587 SNORA31.22-201ENST00000517204 135 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms