Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC007115.1-201ENST00000546853 234 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 SNORD84-203ENST00000584275 78 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.85□□□□□ -2.27
PRKDCP78527 GLUD1P4-201ENST00000590914 418 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 MFSD8-213ENST00000641134 1327 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 PABPC1P7-201ENST00000413177 1513 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.85□□□□□ -2.27
PRKDCP78527 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
PRKDCP78527 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC0.85□□□□□ -2.27
PRKDCP78527 AC093752.1-206ENST00000511823 336 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 AC007275.1-201ENST00000621243 671 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 MIR6086-201ENST00000638065 55 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC0.85□□□□□ -2.27
PRKDCP78527 MIR330-201ENST00000362196 94 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 AL357078.2-201ENST00000416486 427 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.85□□□□□ -2.27
PRKDCP78527 AC096632.1-201ENST00000427395 310 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC0.85□□□□□ -2.27
PRKDCP78527 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC0.85□□□□□ -2.27
PRKDCP78527 AL136363.1-201ENST00000605349 337 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 AC116618.1-201ENST00000634617 774 ntBASIC0.85□□□□□ -2.27
PRKDCP78527 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
PRKDCP78527 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
PRKDCP78527 MIR1197-201ENST00000408818 88 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 AL030996.1-201ENST00000411430 235 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 AL512504.1-201ENST00000415494 778 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.84□□□□□ -2.27
PRKDCP78527 AC008427.1-201ENST00000503102 655 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 AP005435.4-201ENST00000529514 284 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC0.84□□□□□ -2.27
PRKDCP78527 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
PRKDCP78527 AC002546.1-201ENST00000588041 2504 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
PRKDCP78527 SNRPGP13-201ENST00000442212 177 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 SSXP4-201ENST00000451349 245 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 AC009229.3-201ENST00000608056 282 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 AC090517.3-201ENST00000625170 141 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 MIR338-201ENST00000636369 67 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 AC025263.3-201ENST00000622965 1396 ntBASIC0.84□□□□□ -2.27
PRKDCP78527 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
PRKDCP78527 RNU4-7P-201ENST00000364758 141 ntBASIC0.84□□□□□ -2.28
PRKDCP78527 HSPE1P1-201ENST00000421494 318 ntBASIC0.84□□□□□ -2.28
PRKDCP78527 AC022022.1-201ENST00000430304 178 ntBASIC0.84□□□□□ -2.28
PRKDCP78527 RPL30P6-201ENST00000475925 342 ntBASIC0.84□□□□□ -2.28
PRKDCP78527 AC107032.1-201ENST00000485945 480 ntBASIC0.84□□□□□ -2.28
PRKDCP78527 AC103833.1-201ENST00000517442 172 ntBASIC0.84□□□□□ -2.28
PRKDCP78527 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.84□□□□□ -2.28
PRKDCP78527 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.84□□□□□ -2.28
PRKDCP78527 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.84□□□□□ -2.28
PRKDCP78527 DUXAP11-201ENST00000603858 526 ntBASIC0.84□□□□□ -2.28
PRKDCP78527 AC006338.1-201ENST00000618453 749 ntBASIC0.84□□□□□ -2.28
PRKDCP78527 AC006065.5-201ENST00000623427 349 ntBASIC0.84□□□□□ -2.28
PRKDCP78527 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.84□□□□□ -2.28
PRKDCP78527 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.28
PRKDCP78527 ZNF734P-201ENST00000419494 1534 ntBASIC0.84□□□□□ -2.28
PRKDCP78527 ICE2P2-201ENST00000483823 2787 ntBASIC0.84□□□□□ -2.28
PRKDCP78527 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.83□□□□□ -2.28
PRKDCP78527 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
PRKDCP78527 UBE2V1P13-201ENST00000436983 439 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AL353898.1-201ENST00000444055 238 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AP003072.2-201ENST00000527756 676 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 MIR4711-201ENST00000578274 70 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AP001180.3-201ENST00000582221 145 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 MIR4295-201ENST00000585286 85 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 RPS15AP11-201ENST00000594193 385 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
PRKDCP78527 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.83□□□□□ -2.28
PRKDCP78527 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
PRKDCP78527 AP002907.1-201ENST00000606361 1430 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
PRKDCP78527 RNU6-35P-201ENST00000384530 107 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 LSM1P1-201ENST00000438629 273 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 NBEAP1-201ENST00000554452 979 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AC009127.3-201ENST00000570531 403 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
PRKDCP78527 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
PRKDCP78527 MTND4P31-201ENST00000425607 1343 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.83□□□□□ -2.28
PRKDCP78527 AC007098.1-201ENST00000420122 367 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AC113155.1-201ENST00000511141 769 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AC239860.2-201ENST00000525886 270 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AC118942.1-201ENST00000529674 1035 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AL121839.1-201ENST00000556233 1185 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
PRKDCP78527 AC016769.3-201ENST00000396562 315 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 TXNP7-201ENST00000406296 293 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.83□□□□□ -2.28
PRKDCP78527 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.83□□□□□ -2.28
PRKDCP78527 PSMA2P3-201ENST00000429685 675 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 Z85994.2-201ENST00000434327 452 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 SNRPEP4-201ENST00000435815 279 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 HMGN2P13-201ENST00000476476 274 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AC010625.1-201ENST00000511296 403 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.83□□□□□ -2.28
PRKDCP78527 AL031775.1-201ENST00000607014 887 ntBASIC0.83□□□□□ -2.28
PRKDCP78527 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.83□□□□□ -2.28
PRKDCP78527 AL591034.1-201ENST00000407447 340 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms