Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AP000852.1-201ENST00000472460 573 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 RPS4XP13-201ENST00000483219 789 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 MTCO2P30-201ENST00000503662 364 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX6-1P78426 FTH1P9-201ENST00000513251 355 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 APOOP4-201ENST00000513530 597 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 RNA5SP446-201ENST00000515955 82 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX6-1P78426 AC004024.1-201ENST00000549244 247 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX6-1P78426 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
NKX6-1P78426 AC091178.1-203ENST00000584586 279 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 AC006130.2-201ENST00000586202 326 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 AL139395.1-201ENST00000603662 160 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 AL591034.3-201ENST00000605511 685 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 AC090132.2-201ENST00000615881 347 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NKX6-1P78426 AC099654.5-201ENST00000636479 350 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 MIR492-201ENST00000638676 116 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX6-1P78426 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX6-1P78426 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX6-1P78426 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX6-1P78426 AL672296.1-201ENST00000427780 2158 ntBASIC3.86□□□□□ -1.79
NKX6-1P78426 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NKX6-1P78426 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NKX6-1P78426 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX6-1P78426 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX6-1P78426 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX6-1P78426 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX6-1P78426 Y_RNA.100-201ENST00000363141 102 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 RNU6-82P-201ENST00000363970 107 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 RNU6-741P-201ENST00000383889 107 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 MIR554-201ENST00000384874 96 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 MIR670-201ENST00000390142 98 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 RNU6-510P-201ENST00000391239 108 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AL590704.1-201ENST00000402856 794 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 RAP1BP3-201ENST00000407180 549 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 RNA5SP317-201ENST00000410176 116 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 RNA5SP311-201ENST00000411290 116 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NKX6-1P78426 AL160275.3-201ENST00000423876 471 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX6-1P78426 RPL35AP12-201ENST00000425362 338 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AC007919.1-201ENST00000429380 217 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AL132765.1-201ENST00000434165 553 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX6-1P78426 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.85□□□□□ -1.79
NKX6-1P78426 AC012671.1-201ENST00000451912 203 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 HMGN2P26-201ENST00000463169 339 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AC004801.2-202ENST00000463559 283 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 RPL23AP65-201ENST00000475608 468 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 HMGN1P12-201ENST00000499125 195 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 PPBPP1-201ENST00000510807 373 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.85□□□□□ -1.79
NKX6-1P78426 RNA5SP315-201ENST00000516340 116 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 RNU6-914P-201ENST00000516749 109 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 RNA5SP312-201ENST00000517068 116 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.85□□□□□ -1.79
NKX6-1P78426 AC090151.1-201ENST00000520784 730 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AC023050.3-201ENST00000541142 333 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.85□□□□□ -1.79
NKX6-1P78426 AC069240.1-201ENST00000548774 375 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX6-1P78426 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX6-1P78426 HSPE1P5-201ENST00000561489 272 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
NKX6-1P78426 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.85□□□□□ -1.79
NKX6-1P78426 AC053481.4-201ENST00000583164 216 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX6-1P78426 AC007687.1-201ENST00000602704 304 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AC098826.3-201ENST00000603823 466 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX6-1P78426 MIR15A-201ENST00000607334 83 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AC020634.1-201ENST00000608701 549 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AC009570.1-201ENST00000609599 745 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 Y_RNA.804-201ENST00000615262 101 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AC006133.1-201ENST00000617106 264 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.85□□□□□ -1.79
NKX6-1P78426 MIR6891-201ENST00000618788 93 ntBASIC3.85□□□□□ -1.79
NKX6-1P78426 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.85□□□□□ -1.79
NKX6-1P78426 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX6-1P78426 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX6-1P78426 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX6-1P78426 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NKX6-1P78426 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.84□□□□□ -1.79
NKX6-1P78426 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.84□□□□□ -1.79
NKX6-1P78426 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
NKX6-1P78426 OR5P1P-201ENST00000299512 925 ntBASIC3.84□□□□□ -1.79
NKX6-1P78426 SNORD74.4-201ENST00000364129 80 ntBASIC3.84□□□□□ -1.79
NKX6-1P78426 Y_RNA.373-201ENST00000365600 103 ntBASIC3.84□□□□□ -1.79
NKX6-1P78426 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NKX6-1P78426 MIR301A-201ENST00000385261 86 ntBASIC3.84□□□□□ -1.79
NKX6-1P78426 RNA5SP171-201ENST00000391071 115 ntBASIC3.84□□□□□ -1.79
NKX6-1P78426 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NKX6-1P78426 AL139039.1-201ENST00000401900 692 ntBASIC3.84□□□□□ -1.79
NKX6-1P78426 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NKX6-1P78426 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.84□□□□□ -1.79
NKX6-1P78426 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.84□□□□□ -1.79
NKX6-1P78426 DHFRP3-201ENST00000455595 559 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms