Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RPL7P27-201ENST00000403775 720 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 HMGB1P49-201ENST00000418882 569 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 PPP1R11P2-201ENST00000423543 382 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.71□□□□□ -1.98
CCNA1P78396 GTF2IP20-201ENST00000431663 360 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.71□□□□□ -1.98
CCNA1P78396 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.71□□□□□ -1.98
CCNA1P78396 RPL30P9-201ENST00000465586 330 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 RPS27AP9-201ENST00000477681 438 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.71□□□□□ -1.98
CCNA1P78396 AC138853.1-201ENST00000503549 823 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 AC114786.4-201ENST00000508771 728 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.71□□□□□ -1.98
CCNA1P78396 AC114797.1-201ENST00000514003 728 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.71□□□□□ -1.98
CCNA1P78396 RNU1-104P-201ENST00000517280 175 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.71□□□□□ -1.98
CCNA1P78396 SNRPGP18-201ENST00000553000 214 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 TRAV28-201ENST00000557548 323 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.71□□□□□ -1.98
CCNA1P78396 MIR5194-201ENST00000582634 120 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 AC068313.1-201ENST00000604028 1008 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 BX664608.1-201ENST00000610519 487 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 AC010975.3-201ENST00000618727 978 ntBASIC2.71□□□□□ -1.98
CCNA1P78396 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.71□□□□□ -1.98
CCNA1P78396 AC107982.1-201ENST00000507171 1300 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCNA1P78396 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.7□□□□□ -1.98
CCNA1P78396 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCNA1P78396 AC104454.1-201ENST00000421341 1401 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 SNORD114-1-201ENST00000362705 72 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 AC092047.1-201ENST00000424997 240 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 AC008850.1-201ENST00000427546 362 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 DDX3P2-201ENST00000446138 111 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 AC233279.1-201ENST00000455300 423 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 AP1S2P1-201ENST00000457344 379 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 Y_RNA.638-201ENST00000459374 113 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 AP000852.1-201ENST00000472460 573 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.7□□□□□ -1.98
CCNA1P78396 AC114322.1-201ENST00000506771 926 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.7□□□□□ -1.98
CCNA1P78396 MTCO3P27-201ENST00000514397 196 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 RNU6-528P-201ENST00000516926 100 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.7□□□□□ -1.98
CCNA1P78396 AC087465.1-201ENST00000560574 245 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CCNA1P78396 AC122134.1-202ENST00000569111 1201 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 MTATP6P2-201ENST00000603319 678 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 AP000787.2-201ENST00000604432 568 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.7□□□□□ -1.98
CCNA1P78396 AL583856.2-201ENST00000606298 543 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 AL136981.2-201ENST00000617319 734 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 AC084824.4-201ENST00000620106 731 ntBASIC2.7□□□□□ -1.98
CCNA1P78396 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.7□□□□□ -1.98
CCNA1P78396 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCNA1P78396 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCNA1P78396 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CCNA1P78396 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CCNA1P78396 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
CCNA1P78396 SNORA63.3-201ENST00000362682 132 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 MCTS2P-201ENST00000394552 546 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 HMGB1P17-201ENST00000403495 628 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 AL162578.1-201ENST00000406202 378 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.69□□□□□ -1.98
CCNA1P78396 SEPT2P1-201ENST00000419651 180 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 AC093155.1-201ENST00000440164 826 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 OR10R1P-201ENST00000441524 1141 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 CBWD4P-201ENST00000445695 655 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.69□□□□□ -1.98
CCNA1P78396 RBM43P1-201ENST00000476891 1081 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 RPL9P6-201ENST00000492764 598 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 NDUFB4P2-201ENST00000509515 391 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.69□□□□□ -1.98
CCNA1P78396 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.69□□□□□ -1.98
CCNA1P78396 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.69□□□□□ -1.98
CCNA1P78396 MIR5007-201ENST00000583098 95 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.69□□□□□ -1.98
CCNA1P78396 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.69□□□□□ -1.98
CCNA1P78396 AC084824.5-201ENST00000612009 413 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 AC013476.2-201ENST00000614456 459 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 AL590099.1-201ENST00000615276 138 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 SNHG22-203ENST00000617833 660 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 AC069528.2-201ENST00000624849 1991 ntBASIC2.69□□□□□ -1.98
CCNA1P78396 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCNA1P78396 AC093536.2-201ENST00000565257 1406 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 Z82209.1-201ENST00000422141 2135 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 RNU6-28P-201ENST00000362378 107 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCNA1P78396 MIR1289-2-201ENST00000408360 111 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 HMGN2P3-201ENST00000433603 273 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 AC098826.1-201ENST00000433943 471 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 HMGN2P5-201ENST00000436882 273 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 MTND4P6-201ENST00000438297 472 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 BNIP3P2-201ENST00000441221 577 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.68□□□□□ -1.98
CCNA1P78396 DPPA3P1-201ENST00000448050 469 ntBASIC2.68□□□□□ -1.98
CCNA1P78396 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms