Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AL356131.1-201ENST00000405826 414 ntBASIC1.84□□□□□ -2.11
LSM6P62312 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.84□□□□□ -2.11
LSM6P62312 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM6P62312 AC004383.1-201ENST00000438135 289 ntBASIC1.84□□□□□ -2.11
LSM6P62312 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.84□□□□□ -2.11
LSM6P62312 HMGN1P5-201ENST00000448591 263 ntBASIC1.84□□□□□ -2.11
LSM6P62312 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM6P62312 RNU6-717P-201ENST00000459076 104 ntBASIC1.84□□□□□ -2.11
LSM6P62312 AC080013.2-201ENST00000460866 323 ntBASIC1.84□□□□□ -2.11
LSM6P62312 AL049874.1-201ENST00000489560 388 ntBASIC1.84□□□□□ -2.11
LSM6P62312 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LSM6P62312 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM6P62312 AC109471.1-201ENST00000511631 612 ntBASIC1.84□□□□□ -2.11
LSM6P62312 MIR892C-201ENST00000516410 77 ntBASIC1.84□□□□□ -2.11
LSM6P62312 SCARNA3-201ENST00000517097 143 ntBASIC1.84□□□□□ -2.11
LSM6P62312 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.84□□□□□ -2.11
LSM6P62312 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LSM6P62312 NIFKP8-201ENST00000560500 874 ntBASIC1.84□□□□□ -2.11
LSM6P62312 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.84□□□□□ -2.11
LSM6P62312 AC022662.1-201ENST00000580252 331 ntBASIC1.84□□□□□ -2.11
LSM6P62312 MIR3199-1-201ENST00000582434 88 ntBASIC1.84□□□□□ -2.11
LSM6P62312 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.84□□□□□ -2.11
LSM6P62312 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.84□□□□□ -2.11
LSM6P62312 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.84□□□□□ -2.11
LSM6P62312 MIR4275-201ENST00000636486 87 ntBASIC1.84□□□□□ -2.11
LSM6P62312 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM6P62312 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LSM6P62312 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LSM6P62312 RN7SKP158-201ENST00000410453 326 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AL030996.1-201ENST00000411430 235 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AIMP1P2-201ENST00000425294 312 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM6P62312 RPL7P36-201ENST00000444633 681 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM6P62312 SUMO2P2-201ENST00000456482 255 ntBASIC1.83□□□□□ -2.12
LSM6P62312 DYNLL1P5-201ENST00000467158 270 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AC055731.1-201ENST00000474387 401 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM6P62312 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.83□□□□□ -2.12
LSM6P62312 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM6P62312 AP001317.1-201ENST00000531194 960 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.83□□□□□ -2.12
LSM6P62312 HSPE1P3-201ENST00000559254 309 ntBASIC1.83□□□□□ -2.12
LSM6P62312 MTCO1P40-201ENST00000574371 625 ntBASIC1.83□□□□□ -2.12
LSM6P62312 MIR1273D-201ENST00000577266 86 ntBASIC1.83□□□□□ -2.12
LSM6P62312 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.83□□□□□ -2.12
LSM6P62312 AC008749.1-201ENST00000597650 306 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AL096840.1-201ENST00000603287 93 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AL627230.6-201ENST00000611129 280 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AP002791.1-201ENST00000623291 381 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AC106730.3-201ENST00000624568 641 ntBASIC1.83□□□□□ -2.12
LSM6P62312 AC025048.6-202ENST00000627667 438 ntBASIC1.83□□□□□ -2.12
LSM6P62312 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.83□□□□□ -2.12
LSM6P62312 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.83□□□□□ -2.12
LSM6P62312 SNORD56.4-201ENST00000363883 71 ntBASIC1.82□□□□□ -2.12
LSM6P62312 RNU6-796P-201ENST00000391086 107 ntBASIC1.82□□□□□ -2.12
LSM6P62312 RNA5SP425-201ENST00000410336 112 ntBASIC1.82□□□□□ -2.12
LSM6P62312 RNU2-40P-201ENST00000410833 196 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM6P62312 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.82□□□□□ -2.12
LSM6P62312 ZNF863P-201ENST00000426746 417 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM6P62312 MTND5P8-201ENST00000449817 1083 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AL021397.1-201ENST00000451806 248 ntBASIC1.82□□□□□ -2.12
LSM6P62312 MTCO3P11-201ENST00000455103 774 ntBASIC1.82□□□□□ -2.12
LSM6P62312 RPL26P9-201ENST00000457466 433 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AC118282.2-201ENST00000508739 374 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM6P62312 RNA5SP364-201ENST00000516938 78 ntBASIC1.82□□□□□ -2.12
LSM6P62312 RNU2-19P-201ENST00000517288 84 ntBASIC1.82□□□□□ -2.12
LSM6P62312 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM6P62312 AC118273.2-201ENST00000532092 465 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AL133241.1-201ENST00000556832 487 ntBASIC1.82□□□□□ -2.12
LSM6P62312 CYCSP2-201ENST00000558168 301 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM6P62312 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.82□□□□□ -2.12
LSM6P62312 AF131215.7-201ENST00000602443 707 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AC009314.1-201ENST00000603871 304 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AL021997.1-201ENST00000605757 193 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AL590808.1-201ENST00000618696 141 ntBASIC1.82□□□□□ -2.12
LSM6P62312 MIR6130-201ENST00000619419 109 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.82□□□□□ -2.12
LSM6P62312 AC026634.1-201ENST00000634369 198 ntBASIC1.82□□□□□ -2.12
LSM6P62312 MIR219B-201ENST00000637023 88 ntBASIC1.82□□□□□ -2.12
LSM6P62312 MFSD8-213ENST00000641134 1327 ntBASIC1.82□□□□□ -2.12
LSM6P62312 OR4G2P-202ENST00000641004 1759 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AL354685.2-201ENST00000448218 1447 ntBASIC1.82□□□□□ -2.12
LSM6P62312 AC008555.8-201ENST00000623602 2168 ntBASIC1.81□□□□□ -2.12
LSM6P62312 RNU6-582P-201ENST00000362989 107 ntBASIC1.81□□□□□ -2.12
LSM6P62312 Y_RNA.111-201ENST00000363248 100 ntBASIC1.81□□□□□ -2.12
LSM6P62312 MIR888-201ENST00000401186 77 ntBASIC1.81□□□□□ -2.12
LSM6P62312 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM6P62312 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.81□□□□□ -2.12
LSM6P62312 CBWD4P-201ENST00000445695 655 ntBASIC1.81□□□□□ -2.12
LSM6P62312 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM6P62312 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM6P62312 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.81□□□□□ -2.12
LSM6P62312 LARP1BP2-201ENST00000486594 519 ntBASIC1.81□□□□□ -2.12
LSM6P62312 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LSM6P62312 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms