Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL031679.1-201ENST00000400616 525 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AL359704.1-201ENST00000411586 781 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.88□□□□□ -1.95
LMO4P61968 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.88□□□□□ -1.95
LMO4P61968 SDCBPP1-201ENST00000440192 890 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.88□□□□□ -1.95
LMO4P61968 FAM103A2P-201ENST00000444122 354 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.88□□□□□ -1.95
LMO4P61968 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.88□□□□□ -1.95
LMO4P61968 RNU6-420P-201ENST00000458780 107 ntBASIC2.88□□□□□ -1.95
LMO4P61968 HMGB1P25-201ENST00000468402 607 ntBASIC2.88□□□□□ -1.95
LMO4P61968 RN7SL594P-201ENST00000470590 287 ntBASIC2.88□□□□□ -1.95
LMO4P61968 ST13P14-201ENST00000474095 734 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC2.88□□□□□ -1.95
LMO4P61968 MTCO2P30-201ENST00000503662 364 ntBASIC2.88□□□□□ -1.95
LMO4P61968 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.88□□□□□ -1.95
LMO4P61968 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LMO4P61968 RNU6-1281P-201ENST00000516223 105 ntBASIC2.88□□□□□ -1.95
LMO4P61968 RNU6-445P-201ENST00000516949 107 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.88□□□□□ -1.95
LMO4P61968 HSPA8P13-201ENST00000523715 472 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC008489.1-201ENST00000524271 483 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AF235103.2-201ENST00000525753 346 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AP003034.1-201ENST00000534621 422 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC123904.3-201ENST00000547218 814 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.88□□□□□ -1.95
LMO4P61968 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.88□□□□□ -1.95
LMO4P61968 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.88□□□□□ -1.95
LMO4P61968 ZNF192P1-203ENST00000565888 810 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.88□□□□□ -1.95
LMO4P61968 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.88□□□□□ -1.95
LMO4P61968 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.88□□□□□ -1.95
LMO4P61968 AC068790.5-201ENST00000602741 355 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC012507.3-201ENST00000603556 477 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.88□□□□□ -1.95
LMO4P61968 AC087045.1-201ENST00000605856 382 ntBASIC2.88□□□□□ -1.95
LMO4P61968 MIR98-201ENST00000606724 119 ntBASIC2.88□□□□□ -1.95
LMO4P61968 RNU6-87P-201ENST00000607561 108 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC012531.5-201ENST00000611375 151 ntBASIC2.88□□□□□ -1.95
LMO4P61968 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.88□□□□□ -1.95
LMO4P61968 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.88□□□□□ -1.95
LMO4P61968 AC018555.1-201ENST00000567548 1980 ntBASIC2.88□□□□□ -1.95
LMO4P61968 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LMO4P61968 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LMO4P61968 AF127577.6-201ENST00000623352 2191 ntBASIC2.88□□□□□ -1.95
LMO4P61968 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.88□□□□□ -1.95
LMO4P61968 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LMO4P61968 AL645937.1-201ENST00000641739 1652 ntBASIC2.88□□□□□ -1.95
LMO4P61968 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.88□□□□□ -1.95
LMO4P61968 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.87□□□□□ -1.95
LMO4P61968 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.87□□□□□ -1.95
LMO4P61968 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.87□□□□□ -1.95
LMO4P61968 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LMO4P61968 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LMO4P61968 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.87□□□□□ -1.95
LMO4P61968 RNU6-525P-201ENST00000363685 104 ntBASIC2.87□□□□□ -1.95
LMO4P61968 Y_RNA.263-201ENST00000364659 114 ntBASIC2.87□□□□□ -1.95
LMO4P61968 RNU6-744P-201ENST00000365557 107 ntBASIC2.87□□□□□ -1.95
LMO4P61968 RNU6-1316P-201ENST00000384242 108 ntBASIC2.87□□□□□ -1.95
LMO4P61968 Y_RNA.535-201ENST00000384612 99 ntBASIC2.87□□□□□ -1.95
LMO4P61968 MT-TD-201ENST00000387419 68 ntBASIC2.87□□□□□ -1.95
LMO4P61968 snosnR66.1-201ENST00000391095 99 ntBASIC2.87□□□□□ -1.95
LMO4P61968 RNU6-908P-201ENST00000410160 94 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.87□□□□□ -1.95
LMO4P61968 BX323014.1-201ENST00000412876 237 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AC092447.6-201ENST00000414578 210 ntBASIC2.87□□□□□ -1.95
LMO4P61968 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO4P61968 ZNF90P2-204ENST00000419323 1075 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AC099677.1-201ENST00000420575 175 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AC017083.1-201ENST00000428093 483 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO4P61968 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.87□□□□□ -1.95
LMO4P61968 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.87□□□□□ -1.95
LMO4P61968 HMGB1P15-201ENST00000453854 435 ntBASIC2.87□□□□□ -1.95
LMO4P61968 PMCHL2-203ENST00000457791 237 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AC022364.2-201ENST00000457963 554 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO4P61968 AC084357.1-201ENST00000473404 255 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.87□□□□□ -1.95
LMO4P61968 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO4P61968 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO4P61968 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO4P61968 RN7SKP83-201ENST00000516512 178 ntBASIC2.87□□□□□ -1.95
LMO4P61968 RNU6-714P-201ENST00000516963 103 ntBASIC2.87□□□□□ -1.95
LMO4P61968 RNU6-201P-201ENST00000517100 61 ntBASIC2.87□□□□□ -1.95
LMO4P61968 RN7SKP289-201ENST00000517244 295 ntBASIC2.87□□□□□ -1.95
LMO4P61968 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.87□□□□□ -1.95
LMO4P61968 CENPUP1-201ENST00000526649 1202 ntBASIC2.87□□□□□ -1.95
LMO4P61968 SUB1P2-201ENST00000556401 297 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AL359212.1-201ENST00000556608 614 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AL138976.2-201ENST00000563989 694 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AC037471.2-201ENST00000564941 598 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.87□□□□□ -1.95
LMO4P61968 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.87□□□□□ -1.95
LMO4P61968 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.87□□□□□ -1.95
LMO4P61968 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO4P61968 AC005261.5-201ENST00000596280 355 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.87□□□□□ -1.95
LMO4P61968 AC007621.1-201ENST00000604544 437 ntBASIC2.87□□□□□ -1.95
LMO4P61968 AC093788.1-201ENST00000609356 927 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms