Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC126389.1-201ENST00000477436 290 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 RNU4-29P-201ENST00000515943 174 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CKS1BP61024 HMGN1P28-201ENST00000521340 364 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CKS1BP61024 FAM92A1P1-201ENST00000528023 890 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 AC124947.2-202ENST00000552735 133 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 AC027176.1-201ENST00000560204 514 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 AC005000.2-201ENST00000605468 310 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 AL392048.1-201ENST00000613946 534 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 AL158801.5-201ENST00000623123 465 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 AC119674.1-220ENST00000641502 1048 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 LINC02211-204ENST00000642024 1070 ntBASIC1.38□□□□□ -2.19
CKS1BP61024 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CKS1BP61024 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CKS1BP61024 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
CKS1BP61024 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CKS1BP61024 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CKS1BP61024 Y_RNA.333-201ENST00000365274 102 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 OR1L1-202ENST00000373686 1083 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 AL356421.1-201ENST00000403255 413 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 RPL30P4-201ENST00000429309 333 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.37□□□□□ -2.19
CKS1BP61024 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.37□□□□□ -2.19
CKS1BP61024 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.37□□□□□ -2.19
CKS1BP61024 AL512637.2-201ENST00000431287 1256 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.37□□□□□ -2.19
CKS1BP61024 MTCYBP45-201ENST00000435243 565 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 GTF2IP7-202ENST00000436677 309 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.37□□□□□ -2.19
CKS1BP61024 RPL23AP16-201ENST00000441715 421 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CKS1BP61024 AL118520.1-201ENST00000450770 291 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 DNAJC19P8-201ENST00000452887 259 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 AP1S2P1-201ENST00000457344 379 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 AC004924.1-201ENST00000480160 781 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 HMGB1P36-201ENST00000487709 576 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 AC096576.1-201ENST00000489014 359 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 SLC25A15P5-201ENST00000508033 253 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 SNORA31.6-201ENST00000516241 130 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 SCARNA15.2-201ENST00000516409 127 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CKS1BP61024 SNRPGP18-201ENST00000553000 214 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 AC012435.1-202ENST00000568772 240 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 AC024614.2-201ENST00000577584 372 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CKS1BP61024 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.37□□□□□ -2.19
CKS1BP61024 AL161729.4-201ENST00000604650 476 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.37□□□□□ -2.19
CKS1BP61024 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.37□□□□□ -2.19
CKS1BP61024 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.37□□□□□ -2.19
CKS1BP61024 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CKS1BP61024 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CKS1BP61024 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.37□□□□□ -2.19
CKS1BP61024 AC009487.4-201ENST00000624969 3585 ntBASIC1.37□□□□□ -2.19
CKS1BP61024 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CKS1BP61024 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CKS1BP61024 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CKS1BP61024 RNU5A-1-201ENST00000362698 116 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 RNU1-72P-201ENST00000362976 153 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 SNORA80A-201ENST00000363922 136 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 RNA5SP363-201ENST00000365072 115 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 SNORA8-201ENST00000384574 139 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 MIR135A2-201ENST00000384854 100 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 CISD1P1-201ENST00000393907 327 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 HMGB1P17-201ENST00000403495 628 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.36□□□□□ -2.19
CKS1BP61024 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.36□□□□□ -2.19
CKS1BP61024 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.36□□□□□ -2.19
CKS1BP61024 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CKS1BP61024 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 Z82210.1-201ENST00000440037 231 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 AL591719.1-201ENST00000444669 744 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 MTCO1P48-201ENST00000448024 1096 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 AC108938.1-201ENST00000451204 136 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 MTND5P30-201ENST00000452896 1731 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 RFC5P1-201ENST00000454419 874 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 RNU1-98P-201ENST00000458992 160 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 AC034222.1-201ENST00000494052 532 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.36□□□□□ -2.19
CKS1BP61024 AC114781.4-201ENST00000513707 639 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.36□□□□□ -2.19
CKS1BP61024 GNAI2P1-201ENST00000541815 315 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.36□□□□□ -2.19
CKS1BP61024 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.36□□□□□ -2.19
CKS1BP61024 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.36□□□□□ -2.19
CKS1BP61024 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.36□□□□□ -2.19
CKS1BP61024 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.36□□□□□ -2.19
CKS1BP61024 DNAJC19P3-201ENST00000594491 331 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 SEPT7P9-203ENST00000604116 343 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 BNIP3P4-201ENST00000604946 565 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.36□□□□□ -2.19
CKS1BP61024 AC007998.5-201ENST00000622938 237 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 PISRT1-201ENST00000626175 531 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 AL136360.1-201ENST00000503377 1900 ntBASIC1.36□□□□□ -2.19
CKS1BP61024 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.36□□□□□ -2.19
CKS1BP61024 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CKS1BP61024 SEC63P2-201ENST00000503863 1939 ntBASIC1.35□□□□□ -2.19
CKS1BP61024 MIR126-201ENST00000362291 85 ntBASIC1.35□□□□□ -2.19
CKS1BP61024 RNA5SP387-201ENST00000364226 106 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms