Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VSX2P58304 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VSX2P58304 AL359511.1-201ENST00000402970 211 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.33□□□□□ -2.04
VSX2P58304 NDUFB4P7-201ENST00000423198 363 ntBASIC2.33□□□□□ -2.04
VSX2P58304 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VSX2P58304 AC234781.2-201ENST00000426370 994 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AC009414.1-201ENST00000427200 443 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.33□□□□□ -2.04
VSX2P58304 TAAR7P-201ENST00000436141 242 ntBASIC2.33□□□□□ -2.04
VSX2P58304 MTND4P6-201ENST00000438297 472 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.33□□□□□ -2.04
VSX2P58304 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.33□□□□□ -2.04
VSX2P58304 RNF2P1-201ENST00000442955 1010 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AL121871.1-201ENST00000443413 436 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AC009237.8-201ENST00000445492 379 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AL358794.1-201ENST00000445689 381 ntBASIC2.33□□□□□ -2.04
VSX2P58304 EXOSC3P1-201ENST00000448649 500 ntBASIC2.33□□□□□ -2.04
VSX2P58304 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VSX2P58304 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.33□□□□□ -2.04
VSX2P58304 RPL30P5-201ENST00000494923 336 ntBASIC2.33□□□□□ -2.04
VSX2P58304 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.33□□□□□ -2.04
VSX2P58304 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.33□□□□□ -2.04
VSX2P58304 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.33□□□□□ -2.04
VSX2P58304 AC109329.2-201ENST00000519658 482 ntBASIC2.33□□□□□ -2.04
VSX2P58304 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.33□□□□□ -2.04
VSX2P58304 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.33□□□□□ -2.04
VSX2P58304 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.33□□□□□ -2.04
VSX2P58304 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.33□□□□□ -2.04
VSX2P58304 AP002770.2-201ENST00000543613 532 ntBASIC2.33□□□□□ -2.04
VSX2P58304 OR6C7P-201ENST00000547875 934 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AC090888.1-201ENST00000561335 1141 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AC023813.2-201ENST00000564321 469 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AC068135.2-201ENST00000569293 1028 ntBASIC2.33□□□□□ -2.04
VSX2P58304 TPMTP1-201ENST00000592307 737 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AC008739.2-201ENST00000597006 317 ntBASIC2.33□□□□□ -2.04
VSX2P58304 BBIP1P1-201ENST00000602999 279 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AC011451.2-201ENST00000604303 598 ntBASIC2.33□□□□□ -2.04
VSX2P58304 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.33□□□□□ -2.04
VSX2P58304 AC107075.1-201ENST00000613695 314 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AC025034.2-201ENST00000623264 286 ntBASIC2.33□□□□□ -2.04
VSX2P58304 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.33□□□□□ -2.04
VSX2P58304 AC116618.1-201ENST00000634617 774 ntBASIC2.33□□□□□ -2.04
VSX2P58304 AC110079.1-202ENST00000635213 138 ntBASIC2.33□□□□□ -2.04
VSX2P58304 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.33□□□□□ -2.04
VSX2P58304 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.33□□□□□ -2.04
VSX2P58304 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
VSX2P58304 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
VSX2P58304 ZNF519P1-201ENST00000449011 1626 ntBASIC2.32□□□□□ -2.04
VSX2P58304 Y_RNA.192-201ENST00000363977 102 ntBASIC2.32□□□□□ -2.04
VSX2P58304 RNU6-777P-201ENST00000364265 104 ntBASIC2.32□□□□□ -2.04
VSX2P58304 RNU6-413P-201ENST00000384115 107 ntBASIC2.32□□□□□ -2.04
VSX2P58304 RNU6-198P-201ENST00000384258 104 ntBASIC2.32□□□□□ -2.04
VSX2P58304 RNU6-1207P-201ENST00000384343 107 ntBASIC2.32□□□□□ -2.04
VSX2P58304 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VSX2P58304 RNU6-1242P-201ENST00000391052 103 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AL136310.1-201ENST00000404926 654 ntBASIC2.32□□□□□ -2.04
VSX2P58304 CCDC58P2-201ENST00000417131 366 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AC099548.1-201ENST00000421443 426 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.32□□□□□ -2.04
VSX2P58304 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.32□□□□□ -2.04
VSX2P58304 NANOGP5-201ENST00000424456 877 ntBASIC2.32□□□□□ -2.04
VSX2P58304 USP9YP11-201ENST00000427537 717 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AC092427.1-202ENST00000430569 476 ntBASIC2.32□□□□□ -2.04
VSX2P58304 MYL8P-204ENST00000431574 518 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AC098826.1-201ENST00000433943 471 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.32□□□□□ -2.04
VSX2P58304 CR769767.1-201ENST00000436337 346 ntBASIC2.32□□□□□ -2.04
VSX2P58304 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AL714022.1-201ENST00000439897 151 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.32□□□□□ -2.04
VSX2P58304 ARPC3P5-201ENST00000448802 534 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.32□□□□□ -2.04
VSX2P58304 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.32□□□□□ -2.04
VSX2P58304 AC128713.1-201ENST00000471495 306 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AC116337.2-201ENST00000477662 156 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.32□□□□□ -2.04
VSX2P58304 RNU6-1256P-201ENST00000516539 103 ntBASIC2.32□□□□□ -2.04
VSX2P58304 RNA5SP402-201ENST00000517148 110 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.32□□□□□ -2.04
VSX2P58304 AC091544.4-201ENST00000555268 342 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.32□□□□□ -2.04
VSX2P58304 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.32□□□□□ -2.04
VSX2P58304 AC103710.4-201ENST00000609301 899 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.32□□□□□ -2.04
VSX2P58304 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.32□□□□□ -2.04
VSX2P58304 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.32□□□□□ -2.04
VSX2P58304 AC005539.1-201ENST00000443768 1479 ntBASIC2.32□□□□□ -2.04
VSX2P58304 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VSX2P58304 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
VSX2P58304 AC069528.2-201ENST00000624849 1991 ntBASIC2.31□□□□□ -2.04
VSX2P58304 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.31□□□□□ -2.04
VSX2P58304 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VSX2P58304 RNA5SP289-201ENST00000362332 137 ntBASIC2.31□□□□□ -2.04
VSX2P58304 XGY1-201ENST00000381172 446 ntBASIC2.31□□□□□ -2.04
VSX2P58304 SNORA67.4-201ENST00000384688 142 ntBASIC2.31□□□□□ -2.04
VSX2P58304 RSL24D1P4-201ENST00000400938 484 ntBASIC2.31□□□□□ -2.04
VSX2P58304 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
VSX2P58304 RPS3AP37-201ENST00000419176 745 ntBASIC2.31□□□□□ -2.04
VSX2P58304 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms