Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AP001642.1-201ENST00000624727 2117 ntBASIC4.27□□□□□ -1.73
GFRA1P56159 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
GFRA1P56159 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.26□□□□□ -1.73
GFRA1P56159 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.26□□□□□ -1.73
GFRA1P56159 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
GFRA1P56159 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GFRA1P56159 AC083843.3-201ENST00000623679 2186 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
GFRA1P56159 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
GFRA1P56159 OR5P1P-201ENST00000299512 925 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 Y_RNA.148-201ENST00000363557 117 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 SNORA70F-201ENST00000384142 135 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 RNU6-398P-201ENST00000384143 109 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 MIR517A-201ENST00000385001 87 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 AL445529.1-201ENST00000398713 389 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 RN7SKP267-201ENST00000410381 285 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
GFRA1P56159 AC245028.1-201ENST00000423259 256 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 AC018865.2-201ENST00000423631 129 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 RPL21P66-201ENST00000426566 466 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.26□□□□□ -1.73
GFRA1P56159 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.26□□□□□ -1.73
GFRA1P56159 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.26□□□□□ -1.73
GFRA1P56159 MTND5P22-201ENST00000458380 195 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 AC103987.1-201ENST00000473394 348 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 AC018437.1-201ENST00000492214 406 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.26□□□□□ -1.73
GFRA1P56159 CEACAMP10-202ENST00000495431 496 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 AC078918.1-201ENST00000498515 228 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.26□□□□□ -1.73
GFRA1P56159 Y_RNA.661-201ENST00000516003 99 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 Y_RNA.720-201ENST00000517166 92 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.26□□□□□ -1.73
GFRA1P56159 AC023442.1-201ENST00000531247 422 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.26□□□□□ -1.73
GFRA1P56159 AC004024.1-201ENST00000549244 247 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 FKBP1BP1-201ENST00000553366 325 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 DNAJC8P1-201ENST00000554535 372 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 AC084783.1-201ENST00000565846 910 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 CYCSP40-201ENST00000575927 294 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 AC005899.2-201ENST00000584353 90 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 BNIP3P16-201ENST00000589779 534 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 AC005255.1-201ENST00000593748 216 ntBASIC4.26□□□□□ -1.73
GFRA1P56159 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
GFRA1P56159 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.26□□□□□ -1.73
GFRA1P56159 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
GFRA1P56159 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.26□□□□□ -1.73
GFRA1P56159 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.26□□□□□ -1.73
GFRA1P56159 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
GFRA1P56159 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
GFRA1P56159 MTND4P1-201ENST00000457501 1466 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
GFRA1P56159 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.25□□□□□ -1.73
GFRA1P56159 MIR412-201ENST00000362142 91 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 Y_RNA.252-201ENST00000364556 101 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 RNA5SP505-201ENST00000364748 108 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 Y_RNA.463-201ENST00000384271 102 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 SNORD73A-201ENST00000386062 65 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 RNU2-33P-201ENST00000410344 192 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 RN7SKP106-201ENST00000410832 272 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 AC113618.1-201ENST00000416747 285 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 MCFD2P1-201ENST00000417812 300 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 AC140479.3-201ENST00000418944 1126 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 EIF4HP2-201ENST00000424380 563 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
GFRA1P56159 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.25□□□□□ -1.73
GFRA1P56159 RPL23AP50-201ENST00000434149 455 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.25□□□□□ -1.73
GFRA1P56159 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.25□□□□□ -1.73
GFRA1P56159 NOTCH2P1-201ENST00000443481 624 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 MTND5P30-201ENST00000452896 1731 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 FABP5P15-201ENST00000453566 214 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
GFRA1P56159 RN7SL738P-201ENST00000470264 297 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.25□□□□□ -1.73
GFRA1P56159 AC078817.1-201ENST00000492623 435 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.25□□□□□ -1.73
GFRA1P56159 RNU6-470P-201ENST00000515954 104 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 RNU1-86P-201ENST00000516108 154 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 SNORA70.16-201ENST00000516390 95 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 RNU1-107P-201ENST00000516617 154 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.25□□□□□ -1.73
GFRA1P56159 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.25□□□□□ -1.73
GFRA1P56159 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.25□□□□□ -1.73
GFRA1P56159 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.25□□□□□ -1.73
GFRA1P56159 RN7SL52P-201ENST00000584271 284 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 AC007938.3-201ENST00000604965 623 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 MIR6748-201ENST00000610433 71 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 RN7SL722P-201ENST00000617780 284 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 RN7SL565P-201ENST00000618246 284 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
GFRA1P56159 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
GFRA1P56159 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
GFRA1P56159 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
GFRA1P56159 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GFRA1P56159 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GFRA1P56159 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
GFRA1P56159 PNPT1P2-201ENST00000456768 2050 ntBASIC4.25□□□□□ -1.73
GFRA1P56159 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.25□□□□□ -1.73
GFRA1P56159 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms