Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNA5SP492-201ENST00000411330 114 ntBASIC3.01□□□□□ -1.93
VCPP55072 PIGPP2-201ENST00000411569 458 ntBASIC3.01□□□□□ -1.93
VCPP55072 RPL27AP8-201ENST00000424277 446 ntBASIC3.01□□□□□ -1.93
VCPP55072 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.01□□□□□ -1.93
VCPP55072 SNRPEP7-201ENST00000438350 220 ntBASIC3.01□□□□□ -1.93
VCPP55072 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.01□□□□□ -1.93
VCPP55072 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.01□□□□□ -1.93
VCPP55072 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.01□□□□□ -1.93
VCPP55072 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.01□□□□□ -1.93
VCPP55072 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.01□□□□□ -1.93
VCPP55072 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.01□□□□□ -1.93
VCPP55072 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.01□□□□□ -1.93
VCPP55072 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.01□□□□□ -1.93
VCPP55072 OR6K1P-201ENST00000456766 971 ntBASIC3.01□□□□□ -1.93
VCPP55072 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VCPP55072 AC009901.1-201ENST00000506703 541 ntBASIC3.01□□□□□ -1.93
VCPP55072 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.01□□□□□ -1.93
VCPP55072 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.01□□□□□ -1.93
VCPP55072 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.01□□□□□ -1.93
VCPP55072 OR7K1P-201ENST00000546439 926 ntBASIC3.01□□□□□ -1.93
VCPP55072 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.01□□□□□ -1.93
VCPP55072 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.01□□□□□ -1.93
VCPP55072 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.01□□□□□ -1.93
VCPP55072 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.01□□□□□ -1.93
VCPP55072 AC011260.1-201ENST00000578420 472 ntBASIC3.01□□□□□ -1.93
VCPP55072 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.01□□□□□ -1.93
VCPP55072 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.01□□□□□ -1.93
VCPP55072 AC027309.3-201ENST00000623419 351 ntBASIC3.01□□□□□ -1.93
VCPP55072 AC009039.2-201ENST00000624524 529 ntBASIC3.01□□□□□ -1.93
VCPP55072 MIR6733-201ENST00000635723 61 ntBASIC3.01□□□□□ -1.93
VCPP55072 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.01□□□□□ -1.93
VCPP55072 AC011477.1-204ENST00000623416 1325 ntBASIC3□□□□□ -1.93
VCPP55072 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3□□□□□ -1.93
VCPP55072 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VCPP55072 RPL9P7-201ENST00000330965 580 ntBASIC3□□□□□ -1.93
VCPP55072 RNU6-1214P-201ENST00000363650 109 ntBASIC3□□□□□ -1.93
VCPP55072 RNU6-931P-201ENST00000363850 107 ntBASIC3□□□□□ -1.93
VCPP55072 SNORD56.5-201ENST00000364281 72 ntBASIC3□□□□□ -1.93
VCPP55072 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3□□□□□ -1.93
VCPP55072 SNORA3.2-201ENST00000408221 125 ntBASIC3□□□□□ -1.93
VCPP55072 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VCPP55072 RPL19P1-201ENST00000411635 428 ntBASIC3□□□□□ -1.93
VCPP55072 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3□□□□□ -1.93
VCPP55072 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3□□□□□ -1.93
VCPP55072 AC092573.2-201ENST00000434546 243 ntBASIC3□□□□□ -1.93
VCPP55072 UBE2D3P1-201ENST00000436669 444 ntBASIC3□□□□□ -1.93
VCPP55072 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3□□□□□ -1.93
VCPP55072 MTND1P31-201ENST00000449206 961 ntBASIC3□□□□□ -1.93
VCPP55072 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3□□□□□ -1.93
VCPP55072 MTND2P14-201ENST00000482139 351 ntBASIC3□□□□□ -1.93
VCPP55072 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3□□□□□ -1.93
VCPP55072 AC147055.4-201ENST00000504399 745 ntBASIC3□□□□□ -1.93
VCPP55072 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3□□□□□ -1.93
VCPP55072 AC112673.1-201ENST00000513168 575 ntBASIC3□□□□□ -1.93
VCPP55072 AC023538.1-201ENST00000534576 736 ntBASIC3□□□□□ -1.93
VCPP55072 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3□□□□□ -1.93
VCPP55072 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3□□□□□ -1.93
VCPP55072 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3□□□□□ -1.93
VCPP55072 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3□□□□□ -1.93
VCPP55072 MTATP6P24-201ENST00000576835 677 ntBASIC3□□□□□ -1.93
VCPP55072 MIR3609-201ENST00000582661 80 ntBASIC3□□□□□ -1.93
VCPP55072 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3□□□□□ -1.93
VCPP55072 AC020895.1-201ENST00000595362 272 ntBASIC3□□□□□ -1.93
VCPP55072 AC013444.2-201ENST00000603317 787 ntBASIC3□□□□□ -1.93
VCPP55072 AC019159.1-201ENST00000605094 187 ntBASIC3□□□□□ -1.93
VCPP55072 AC090115.4-201ENST00000609970 188 ntBASIC3□□□□□ -1.93
VCPP55072 AC004696.1-201ENST00000614345 607 ntBASIC3□□□□□ -1.93
VCPP55072 AC021755.4-201ENST00000616620 456 ntBASIC3□□□□□ -1.93
VCPP55072 AC002064.3-201ENST00000623448 346 ntBASIC3□□□□□ -1.93
VCPP55072 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3□□□□□ -1.93
VCPP55072 AC138915.1-201ENST00000565427 1685 ntBASIC3□□□□□ -1.93
VCPP55072 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3□□□□□ -1.93
VCPP55072 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
VCPP55072 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.99□□□□□ -1.93
VCPP55072 AP000568.1-201ENST00000282964 442 ntBASIC2.99□□□□□ -1.93
VCPP55072 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VCPP55072 Y_RNA.234-201ENST00000364409 97 ntBASIC2.99□□□□□ -1.93
VCPP55072 SNORA9.2-201ENST00000365361 133 ntBASIC2.99□□□□□ -1.93
VCPP55072 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VCPP55072 SNORD21-201ENST00000383953 95 ntBASIC2.99□□□□□ -1.93
VCPP55072 MIR181A2-201ENST00000384863 110 ntBASIC2.99□□□□□ -1.93
VCPP55072 FO393413.1-201ENST00000402892 195 ntBASIC2.99□□□□□ -1.93
VCPP55072 AL590004.2-201ENST00000404787 371 ntBASIC2.99□□□□□ -1.93
VCPP55072 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.99□□□□□ -1.93
VCPP55072 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.99□□□□□ -1.93
VCPP55072 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
VCPP55072 BEND7P1-201ENST00000422058 457 ntBASIC2.99□□□□□ -1.93
VCPP55072 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.99□□□□□ -1.93
VCPP55072 LSM1P1-201ENST00000438629 273 ntBASIC2.99□□□□□ -1.93
VCPP55072 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.99□□□□□ -1.93
VCPP55072 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.99□□□□□ -1.93
VCPP55072 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.99□□□□□ -1.93
VCPP55072 snoU13.8-201ENST00000458890 104 ntBASIC2.99□□□□□ -1.93
VCPP55072 RPL31P60-201ENST00000478450 367 ntBASIC2.99□□□□□ -1.93
VCPP55072 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.99□□□□□ -1.93
VCPP55072 AC087373.1-201ENST00000524920 491 ntBASIC2.99□□□□□ -1.93
VCPP55072 CASP1P1-201ENST00000526345 212 ntBASIC2.99□□□□□ -1.93
VCPP55072 UBTFL10-201ENST00000528532 562 ntBASIC2.99□□□□□ -1.93
VCPP55072 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VCPP55072 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms