Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MIR325-201ENST00000385260 98 ntBASIC2.58□□□□□ -2
ACLYP53396 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
ACLYP53396 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.58□□□□□ -2
ACLYP53396 RPL21P75-201ENST00000396599 483 ntBASIC2.58□□□□□ -2
ACLYP53396 RPL21P28-201ENST00000401418 483 ntBASIC2.58□□□□□ -2
ACLYP53396 AL592114.1-201ENST00000403842 483 ntBASIC2.58□□□□□ -2
ACLYP53396 TPMTP2-201ENST00000414372 726 ntBASIC2.58□□□□□ -2
ACLYP53396 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.58□□□□□ -2
ACLYP53396 Z85995.1-201ENST00000415547 335 ntBASIC2.58□□□□□ -2
ACLYP53396 SPA17P1-201ENST00000416656 452 ntBASIC2.58□□□□□ -2
ACLYP53396 Z75741.2-201ENST00000417272 1167 ntBASIC2.58□□□□□ -2
ACLYP53396 AC109583.1-201ENST00000432156 268 ntBASIC2.58□□□□□ -2
ACLYP53396 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.58□□□□□ -2
ACLYP53396 AL109741.2-201ENST00000455561 343 ntBASIC2.58□□□□□ -2
ACLYP53396 RPL21P39-201ENST00000463605 483 ntBASIC2.58□□□□□ -2
ACLYP53396 AC011979.1-201ENST00000472300 483 ntBASIC2.58□□□□□ -2
ACLYP53396 TRBV1-201ENST00000476502 284 ntBASIC2.58□□□□□ -2
ACLYP53396 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.58□□□□□ -2
ACLYP53396 RPL21P93-201ENST00000480465 489 ntBASIC2.58□□□□□ -2
ACLYP53396 AC233702.1-201ENST00000482905 502 ntBASIC2.58□□□□□ -2
ACLYP53396 AC087190.1-201ENST00000484462 480 ntBASIC2.58□□□□□ -2
ACLYP53396 AC093591.1-201ENST00000491435 481 ntBASIC2.58□□□□□ -2
ACLYP53396 RPL21P16-201ENST00000495531 483 ntBASIC2.58□□□□□ -2
ACLYP53396 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.58□□□□□ -2
ACLYP53396 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.58□□□□□ -2
ACLYP53396 AC104090.1-201ENST00000506341 1171 ntBASIC2.58□□□□□ -2
ACLYP53396 AC112673.1-201ENST00000513168 575 ntBASIC2.58□□□□□ -2
ACLYP53396 RNU6-1256P-201ENST00000516539 103 ntBASIC2.58□□□□□ -2
ACLYP53396 HSPE1P18-201ENST00000517602 280 ntBASIC2.58□□□□□ -2
ACLYP53396 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.58□□□□□ -2
ACLYP53396 LRRC6P1-201ENST00000532188 885 ntBASIC2.58□□□□□ -2
ACLYP53396 AC124947.2-202ENST00000552735 133 ntBASIC2.58□□□□□ -2
ACLYP53396 AC025281.1-201ENST00000567026 265 ntBASIC2.58□□□□□ -2
ACLYP53396 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
ACLYP53396 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
ACLYP53396 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
ACLYP53396 AC061975.8-201ENST00000587058 721 ntBASIC2.58□□□□□ -2
ACLYP53396 AL136363.1-201ENST00000605349 337 ntBASIC2.58□□□□□ -2
ACLYP53396 AC112220.2-201ENST00000605513 533 ntBASIC2.58□□□□□ -2
ACLYP53396 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
ACLYP53396 AC104237.2-201ENST00000612456 443 ntBASIC2.58□□□□□ -2
ACLYP53396 AC002550.2-201ENST00000621246 394 ntBASIC2.58□□□□□ -2
ACLYP53396 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.58□□□□□ -2
ACLYP53396 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ACLYP53396 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.57□□□□□ -2
ACLYP53396 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.57□□□□□ -2
ACLYP53396 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.57□□□□□ -2
ACLYP53396 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.57□□□□□ -2
ACLYP53396 SNORD56.5-201ENST00000364281 72 ntBASIC2.57□□□□□ -2
ACLYP53396 Y_RNA.234-201ENST00000364409 97 ntBASIC2.57□□□□□ -2
ACLYP53396 SNORA64-201ENST00000384674 134 ntBASIC2.57□□□□□ -2
ACLYP53396 SNORA40.4-201ENST00000390971 128 ntBASIC2.57□□□□□ -2
ACLYP53396 FO393413.1-201ENST00000402892 195 ntBASIC2.57□□□□□ -2
ACLYP53396 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.57□□□□□ -2
ACLYP53396 RN7SKP32-201ENST00000410167 303 ntBASIC2.57□□□□□ -2
ACLYP53396 AC018630.2-202ENST00000422992 927 ntBASIC2.57□□□□□ -2
ACLYP53396 AL365496.1-201ENST00000426885 215 ntBASIC2.57□□□□□ -2
ACLYP53396 AC098826.1-201ENST00000433943 471 ntBASIC2.57□□□□□ -2
ACLYP53396 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.57□□□□□ -2
ACLYP53396 RNF2P1-201ENST00000442955 1010 ntBASIC2.57□□□□□ -2
ACLYP53396 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.57□□□□□ -2
ACLYP53396 ARPC3P5-201ENST00000448802 534 ntBASIC2.57□□□□□ -2
ACLYP53396 AP000705.1-201ENST00000454567 350 ntBASIC2.57□□□□□ -2
ACLYP53396 RPL18AP17-201ENST00000455326 198 ntBASIC2.57□□□□□ -2
ACLYP53396 snoU13.8-201ENST00000458890 104 ntBASIC2.57□□□□□ -2
ACLYP53396 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
ACLYP53396 MTND4LP3-201ENST00000468320 276 ntBASIC2.57□□□□□ -2
ACLYP53396 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.57□□□□□ -2
ACLYP53396 AC079203.1-201ENST00000487972 404 ntBASIC2.57□□□□□ -2
ACLYP53396 RPS27P26-201ENST00000494583 239 ntBASIC2.57□□□□□ -2
ACLYP53396 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.57□□□□□ -2
ACLYP53396 RPL21P131-201ENST00000497298 483 ntBASIC2.57□□□□□ -2
ACLYP53396 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.57□□□□□ -2
ACLYP53396 SUMO2P5-201ENST00000506790 245 ntBASIC2.57□□□□□ -2
ACLYP53396 AC107222.1-201ENST00000510899 637 ntBASIC2.57□□□□□ -2
ACLYP53396 AC093752.1-206ENST00000511823 336 ntBASIC2.57□□□□□ -2
ACLYP53396 AC006499.2-201ENST00000513470 337 ntBASIC2.57□□□□□ -2
ACLYP53396 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.57□□□□□ -2
ACLYP53396 MTCYBP20-201ENST00000524239 1129 ntBASIC2.57□□□□□ -2
ACLYP53396 SETP2-201ENST00000553886 926 ntBASIC2.57□□□□□ -2
ACLYP53396 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.57□□□□□ -2
ACLYP53396 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.57□□□□□ -2
ACLYP53396 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.57□□□□□ -2
ACLYP53396 AC068135.2-201ENST00000569293 1028 ntBASIC2.57□□□□□ -2
ACLYP53396 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.57□□□□□ -2
ACLYP53396 AL158211.4-201ENST00000606988 584 ntBASIC2.57□□□□□ -2
ACLYP53396 AC024060.1-201ENST00000607052 494 ntBASIC2.57□□□□□ -2
ACLYP53396 AC004852.3-201ENST00000614131 326 ntBASIC2.57□□□□□ -2
ACLYP53396 OR1S1-201ENST00000624470 978 ntBASIC2.57□□□□□ -2
ACLYP53396 AL049641.1-201ENST00000441055 1948 ntBASIC2.57□□□□□ -2
ACLYP53396 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
ACLYP53396 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
ACLYP53396 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
ACLYP53396 RNU1-105P-201ENST00000363470 161 ntBASIC2.56□□□□□ -2
ACLYP53396 RNU4-51P-201ENST00000364206 140 ntBASIC2.56□□□□□ -2
ACLYP53396 Y_RNA.408-201ENST00000383987 102 ntBASIC2.56□□□□□ -2
ACLYP53396 Y_RNA.548-201ENST00000384656 105 ntBASIC2.56□□□□□ -2
ACLYP53396 SNORA40.2-201ENST00000390847 128 ntBASIC2.56□□□□□ -2
ACLYP53396 AL162578.1-201ENST00000406202 378 ntBASIC2.56□□□□□ -2
ACLYP53396 RNA5SP492-201ENST00000411330 114 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms