Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC093155.1-201ENST00000440164 826 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.38□□□□□ -2.19
POLR2JP52435 RPL30P5-201ENST00000494923 336 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.38□□□□□ -2.19
POLR2JP52435 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.38□□□□□ -2.19
POLR2JP52435 RNU1-41P-201ENST00000516161 162 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 RNU1-48P-201ENST00000516400 162 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.38□□□□□ -2.19
POLR2JP52435 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.38□□□□□ -2.19
POLR2JP52435 AC074029.2-201ENST00000551045 634 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.38□□□□□ -2.19
POLR2JP52435 MIR3683-201ENST00000580847 82 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 AL109918.3-201ENST00000603072 338 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 AC002487.1-201ENST00000604565 994 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 AC055876.5-201ENST00000605667 259 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 AP002826.1-201ENST00000608835 315 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.38□□□□□ -2.19
POLR2JP52435 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.38□□□□□ -2.19
POLR2JP52435 DDX10P1-201ENST00000448545 1933 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 ADAM3A-203ENST00000461344 2157 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 AC008568.2-201ENST00000623862 2313 ntBASIC1.38□□□□□ -2.19
POLR2JP52435 MTND5P31-201ENST00000419366 1374 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
POLR2JP52435 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
POLR2JP52435 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
POLR2JP52435 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
POLR2JP52435 RNU1-62P-201ENST00000362599 164 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 RNU4-23P-201ENST00000362839 140 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 RNU6-152P-201ENST00000384037 107 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 SEPT2P1-201ENST00000419651 180 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 AL513185.2-201ENST00000425543 193 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 AL354695.1-201ENST00000427935 228 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
POLR2JP52435 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.37□□□□□ -2.19
POLR2JP52435 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.37□□□□□ -2.19
POLR2JP52435 CDC42P1-201ENST00000456658 548 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 RPS20P24-201ENST00000457473 361 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 VPS26AP1-201ENST00000483197 979 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 RPS27P23-201ENST00000487608 251 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 FAM92A1P2-202ENST00000504766 877 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 SCARNA17.1-201ENST00000516211 143 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 SCARNA17.2-201ENST00000516334 143 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
POLR2JP52435 AP005902.1-201ENST00000521358 186 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 OR4P1P-201ENST00000530808 1136 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.37□□□□□ -2.19
POLR2JP52435 SNORD53B-201ENST00000577887 78 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 AC005498.1-201ENST00000592125 465 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 AC135507.1-201ENST00000607214 561 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 SCARNA17.4-201ENST00000614296 143 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 AC005296.1-201ENST00000616145 209 ntBASIC1.37□□□□□ -2.19
POLR2JP52435 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
POLR2JP52435 RNU4-42P-201ENST00000364738 142 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 AC068050.1-201ENST00000394891 380 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 RN7SKP51-201ENST00000410781 304 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 AC074117.2-201ENST00000417130 397 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 GTF2IP7-202ENST00000436677 309 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.36□□□□□ -2.19
POLR2JP52435 HSPE1P21-201ENST00000438283 308 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 HMGB1P18-201ENST00000438801 619 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 BNIP3P2-201ENST00000441221 577 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.36□□□□□ -2.19
POLR2JP52435 DYNLL1P5-201ENST00000467158 270 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 AC104685.1-201ENST00000502445 371 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 AC147055.4-201ENST00000504399 745 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.36□□□□□ -2.19
POLR2JP52435 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.36□□□□□ -2.19
POLR2JP52435 EEF1B2P4-201ENST00000551398 348 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.36□□□□□ -2.19
POLR2JP52435 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.36□□□□□ -2.19
POLR2JP52435 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.36□□□□□ -2.19
POLR2JP52435 MIR4513-201ENST00000581077 86 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 AL391597.1-201ENST00000618707 694 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 AC068722.2-201ENST00000618734 544 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.36□□□□□ -2.19
POLR2JP52435 AP003399.1-201ENST00000637534 361 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 AC080128.1-201ENST00000474389 1917 ntBASIC1.36□□□□□ -2.19
POLR2JP52435 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
POLR2JP52435 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
POLR2JP52435 U8.1-201ENST00000362843 134 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 RNU6-921P-201ENST00000384361 107 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 MIR649-201ENST00000384843 97 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 SNORA67.6-201ENST00000391093 99 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 AC092745.2-202ENST00000411880 369 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.35□□□□□ -2.19
POLR2JP52435 AL109913.1-201ENST00000421173 514 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.35□□□□□ -2.19
POLR2JP52435 RPP40P1-201ENST00000426762 456 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 MTND1P33-201ENST00000446251 917 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.35□□□□□ -2.19
POLR2JP52435 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.35□□□□□ -2.19
POLR2JP52435 RNU6-420P-201ENST00000458780 107 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 PABPC1P3-201ENST00000469174 459 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
POLR2JP52435 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms